RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 PADI4Q9UM07 663 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 SMNDC1O75940 238 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 ZSWIM7Q19AV6 140 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 CARNMT1Q8N4J0 409 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 HASPINQ8TF76 798 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 STXBP3O00186 592 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 ALDH9A1P49189 494 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 ZBED6P86452 979 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 TAF13Q15543 124 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 VPS37AQ8NEZ2 397 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 C1orf54Q8WWF1 131 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 PCDHB6Q9Y5E3 794 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 GMFGO60234 142 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 POU1F1P28069 291 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 RBAKQ9NYW8 714 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 KRT38O76015 456 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 PSMD7P51665 324 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 MRPS35P82673 323 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 ARSJQ5FYB0 599 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 AIM2O14862 343 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 PRELPP51888 382 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 CYP4A22Q5TCH4 519 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 TTC13Q8NBP0 860 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 CIPCQ9C0C6 399 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 KLC4Q9NSK0 619 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SNUPNO95149 360 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 APRTP07741 180 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 TEDDM1Q5T9Z0 273 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 F8W810 466 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 RPN2P04844 631 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 COX10Q12887 443 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 MTMR2Q13614 643 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 INSRP06213 1382 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 H2AFYO75367 372 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 YY1P25490 414 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 THPOP40225 353 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 CAMK2GQ13555 558 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 ST13P5Q8NFI4 369 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SYNMO15061 1565 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 NDUFS2O75306 463 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SCGNO76038 276 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 FGFR4P22455 802 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SRSF11Q05519 484 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 GALNTL6Q49A17 601 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 TIGD7Q6NT04 549 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 C11orf57Q6ZUT1 292 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 ZFATQ9P243 1243 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 CYP21A2P08686 494 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 GGCXP38435 758 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 MACC1Q6ZN28 852 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 SRLQ86TD4 932 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 AAASQ9NRG9 546 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
CACNA1A-258ENST00000638029 ASS1P00966 412 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TMEM132BQ14DG7 1078 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 CAND2O75155 1236 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 ATP5HO75947 161 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 CCNIQ14094 377 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 OXCT2Q9BYC2 517 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 ADAMTS1Q9UHI8 967 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 PMS2P54278 862 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 IRX1P78414 480 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 INPP5AQ14642 412 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TMEM35BQ8NCS4 154 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 SLC7A14Q8TBB6 771 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 GINS4Q9BRT9 223 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 IMPAD1Q9NX62 359 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 SNX6Q9UNH7 406 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 GPC5P78333 572 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 GRAPQ13588 217 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 NCAPHQ15003 741 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 IER5Q5VY09 327 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 ALKBH5Q6P6C2 394 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 PANX2Q96RD6 677 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 AKAP7Q9P0M2 348 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 STAT3P40763 770 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 TBX3O15119 743 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 HLA-DQA2P01906 255 aa17.04■□□□□ 0.32
CACNA1A-258ENST00000638029 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms