RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 ATP2A1O14983 1001 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 APOA1P02647 267 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 RXRBP28702 533 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 GTF2H1P32780 548 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ETFBP38117 255 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DAB2P98082 770 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 GIT2Q14161 759 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TGFBIQ15582 683 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 LONRF1Q17RB8 773 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CERKLQ49MI3 558 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TRMT10CQ7L0Y3 403 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SH3BP5LQ7L8J4 393 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 STX12Q86Y82 276 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 NEDD1Q8NHV4 660 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SSH3Q8TE77 659 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 KBTBD7Q8WVZ9 684 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DPF3Q92784 378 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 OSBP2Q969R2 916 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DHRS9Q9BPW9 319 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SPC25Q9HBM1 224 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 VPS45Q9NRW7 570 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 FBXO2Q9UK22 296 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 FLT1P17948 1338 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ATP7AQ04656 1500 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TMEM2Q9UHN6 1383 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TK2O00142 265 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ZW10O43264 779 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 AQP9O43315 295 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 GTPBP6O43824 516 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF862O60290 1169 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ALDH2P05091 517 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ENO1P06733 434 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 HSPA6P17066 643 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TTKP33981 857 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DHX34Q14147 1143 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TRIM71Q2Q1W2 868 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CORO6Q6QEF8 472 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ANKRD13DQ6ZTN6 518 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SLC51BQ86UW2 128 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TICAM1Q8IUC6 712 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PJA1Q8NG27 643 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ZFP28Q8NHY6 868 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CDC26Q8NHZ8 85 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 NCOA7Q8NI08 942 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 LRRC20Q8TCA0 184 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CADM1Q9BY67 442 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 BLZF1Q9H2G9 400 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 RPRD1BQ9NQG5 326 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 HOMER2Q9NSB8 354 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 HEY2Q9UBP5 337 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ARHGAP26Q9UNA1 814 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TMEM5Q9Y2B1 443 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 NUMBLQ9Y6R0 609 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 LRRIQ4A6NIV6 560 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 H0YGN5 161 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 H3BSA7 217 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PTCD1O75127 700 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CALB1P05937 261 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PDE6AP16499 860 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ITIH1P19827 911 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 M6PRP20645 277 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 RPA1P27694 616 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PIK3CAP42336 1068 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 STT3AP46977 705 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 EPHA7Q15375 998 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PTPROQ16827 1216 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PROSER3Q2NL68 480 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 EFHC1Q5JVL4 640 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 PPM1LQ5SGD2 360 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF658Q5TYW1 1059 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TTI2Q6NXR4 508 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TTC27Q6P3X3 843 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 RIPOR1Q6ZS17 1223 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 MCM10Q7L590 875 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 CCDC103Q8IW40 242 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 STAMQ92783 540 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 TRIM51Q9BSJ1 452 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SCPEP1Q9HB40 452 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 MAP3K20Q9NYL2 800 aaKnown RBP6.01□□□□□ -1.45
SCN1A-216ENST00000637968 VPS54Q9P1Q0 977 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 IGSF9Q9P2J2 1179 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 KCNN3Q9UGI6 736 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 HMGXB4Q9UGU5 601 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DNAJC16Q9Y2G8 782 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 STXBP5LQ9Y2K9 1186 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 NFS1Q9Y697 457 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 NPATQ14207 1427 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 SALL3Q9BXA9 1300 aa6.01□□□□□ -1.45
SCN1A-216ENST00000637968 DNALI1O14645 258 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 TLR2O60603 784 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 DLGAP3O95886 979 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 EEF1B2P24534 225 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 COPZ1P61923 177 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 OTUD4Q01804 1114 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 DPYSQ14117 519 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 IGSF11Q5DX21 431 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 KIAA1755Q5JYT7 1200 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SPDYAQ5MJ70 313 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms