RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-255	ENST00000637966	PIR	O00625	290 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	EOMES	O95936	686 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TH	P07101	528 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CD58	P19256	250 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MLH1	P40692	756 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SCARA5	Q6ZMJ2	495 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RPUSD2	Q8IZ73	545 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MNS1	Q8NEH6	495 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	DBF4B	Q8NFT6	615 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	LINC01599	Q8WXQ3	324 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	DDX1	Q92499	740 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TSGA10	Q9BZW7	698 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RSAD1	Q9HA92	442 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CYP3A43	Q9HB55	503 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SLC38A7	Q9NVC3	462 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SALL4	Q9UJQ4	1053 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ATP11B	Q9Y2G3	1177 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CAPN6	Q9Y6Q1	641 aa		13.19	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SCN1A	P35498	2009 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PARN	O95453	639 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ATP1A1	P05023	1023 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	IBSP	P21815	317 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	LRPAP1	P30533	357 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PDE6C	P51160	858 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	AFF1	P51825	1210 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ZNF132	P52740	706 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CDH8	P55286	799 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CDR2	Q01850	454 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	KIF5A	Q12840	1032 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TAF3	Q5VWG9	929 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TXLNB	Q8N3L3	684 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SEPT8	Q92599	483 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SDCBP2	Q9H190	292 aa		13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SEPT11	Q9NVA2	429 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ENPP3	O14638	875 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CALCA	P01258	141 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MME	P08473	750 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	H2AFX	P16104	143 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RAP1GAP	P47736	663 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SCNN1G	P51170	649 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CCL23	P55773	120 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TNNC1	P63316	161 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	FMO1	Q01740	532 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TUBB2A	Q13885	445 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PAPD7	Q5XG87	772 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	FBXO38	Q6PIJ6	1188 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	NECAB2	Q7Z6G3	386 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ZNF677	Q86XU0	584 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	APBB2	Q92870	758 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SCLY	Q96I15	445 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MMS19	Q96T76	1030 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PCDHB18P	Q96TA0	734 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TUBB2B	Q9BVA1	445 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PPP1R12C	Q9BZL4	782 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	WNT8A	Q9H1J5	351 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SMYD3	Q9H7B4	428 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	GOLGA2P5	Q9HBQ8	144 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TMEM39A	Q9NV64	488 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TBX21	Q9UL17	535 aa		13.17	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MACROD2	A1Z1Q3	448 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ENC1	O14682	589 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CXCL10	P02778	98 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CYP2C18	P33260	490 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PNPLA4	P41247	253 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	LRRC26	Q2I0M4	334 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MTERF4	Q7Z6M4	381 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PALB2	Q86YC2	1186 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PDCL2	Q8N4E4	241 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SECISBP2L	Q93073	1101 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ZNF560	Q96MR9	790 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PRDM10	Q9NQV6	1147 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SNX9	Q9Y5X1	595 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	KPNA7	A9QM74	516 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	INPPL1	O15357	1258 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	GZMA	P12544	262 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	GNA15	P30679	374 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TTC39C	Q8N584	583 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	PACSIN1	Q9BY11	444 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	INTU	Q9ULD6	942 aa		13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	KIAA0100	Q14667	2235 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SCN5A	Q14524	2016 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TMCO5B	A8MYB1	307 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SPTLC1	O15269	473 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RRP9	O43818	475 aa	Known RBP	13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CILP	O75339	1184 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	MOCS3	O95396	460 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	POMC	P01189	267 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	CLTB	P09497	229 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	H2AFZ	P0C0S5	128 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RPL9	P32969	192 aa	Known RBP	13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TAF6	P49848	677 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	RAD23B	P54727	409 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	LILRA4	P59901	499 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	WHAMMP3	Q1A5X7	153 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	TCTN1	Q2MV58	587 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	SV2C	Q496J9	727 aa		13.15	□□□□□ -0.3
CACNA1A-255	ENST00000637966	ZNF394	Q53GI3	561 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms