RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ZDHHC18Q9NUE0 388 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 IKBKGQ9Y6K9 419 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ZMYM2Q9UBW7 1377 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 TMEM120BA0PK00 339 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 PSTPIP1O43586 416 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ACSL3O95573 720 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ATP6V1G2O95670 118 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 NQO1P15559 274 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 SKIV2L2P42285 1042 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 COPS2P61201 443 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 YWHAEP62258 255 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 FPGSQ05932 587 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 PTK6Q13882 451 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 TRADDQ15628 312 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 XKR9Q5GH70 373 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 FAM102BQ5T8I3 360 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 C6orf163Q5TEZ5 329 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ANGEL2Q5VTE6 544 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ACAD10Q6JQN1 1059 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 APOBEC3HQ6NTF7 200 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 HAUS6Q7Z4H7 955 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 SIAH1Q8IUQ4 282 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 PRELID2Q8N945 189 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MDM1Q8TC05 714 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 LRRC8CQ8TDW0 803 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 SLCO2A1Q92959 643 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ARHGEF26Q96DR7 871 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MAGEB18Q96M61 343 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 TGS1Q96RS0 853 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 FIZ1Q96SL8 496 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 PAIP2Q9BPZ3 127 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MXRA8Q9BRK3 442 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 PCIF1Q9H4Z3 704 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 CD248Q9HCU0 757 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MYOZ2Q9NPC6 264 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ANKEF1Q9NU02 776 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MAP3K20Q9NYL2 800 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 MCM8Q9UJA3 840 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ANAPC7Q9UJX3 599 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 TPX2Q9ULW0 747 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ZHX2Q9Y6X8 837 aa4.22□□□□□ -1.73
SCN1A-214ENST00000637038 ZNF638Q14966 1978 aaKnown RBP4.22□□□□□ -1.73
SCN1A-214ENST00000637038 WDR64B1ANS9 1081 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 TCP11X1B4DZS4 312 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 SMAPO00193 183 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 OPLAHO14841 1288 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 TPD52L2O43399 206 aaKnown RBP4.21□□□□□ -1.73
SCN1A-214ENST00000637038 CABYRO75952 493 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 TTC4O95801 387 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 ABHD2P08910 425 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 KRT15P19012 456 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 POU3F3P20264 500 aaPredicted RBP4.21□□□□□ -1.73
SCN1A-214ENST00000637038 PAX7P23759 505 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 ELF3P78545 371 aaPredicted RBP4.21□□□□□ -1.73
SCN1A-214ENST00000637038 PPP2R5DQ14738 602 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 E2F5Q15329 346 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 CBWD6Q4V339 395 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 CBWD3Q5JTY5 395 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 CBWD5Q5RIA9 395 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 WLSQ5T9L3 541 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 TATDN1Q6P1N9 297 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 XRRA1Q6P2D8 792 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 PIGWQ7Z7B1 504 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 PCGF5Q86SE9 256 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 FAM71AQ8IYT1 594 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 MCPH1Q8NEM0 835 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 UHMK1Q8TAS1 419 aaKnown RBP4.21□□□□□ -1.73
SCN1A-214ENST00000637038 ATOH1Q92858 354 aaPredicted RBP4.21□□□□□ -1.73
SCN1A-214ENST00000637038 HLA-CQ95604 372 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 UNC45AQ9H3U1 944 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 ST6GALNAC4Q9H4F1 302 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 POLD4Q9HCU8 107 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 KMT5AQ9NQR1 393 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 CCPG1Q9ULG6 757 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 ZNF536O15090 1300 aa4.21□□□□□ -1.73
SCN1A-214ENST00000637038 PDCD11Q14690 1871 aaKnown RBP4.21□□□□□ -1.74
SCN1A-214ENST00000637038 SRCAPQ6ZRS2 3230 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 EXOC1LA0A1B0GW35 172 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 FAM47DPA6NHR8 397 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 DDX39AO00148 427 aaKnown RBP4.21□□□□□ -1.74
SCN1A-214ENST00000637038 MGRN1O60291 552 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 SNX3O60493 162 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 PLA2G6O60733 806 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 TJP3O95049 919 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 FDX1P10109 184 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 IBSPP21815 317 aaPredicted RBP4.21□□□□□ -1.74
SCN1A-214ENST00000637038 PTGIRP43119 386 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 PSMC5P62195 406 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 TAP1Q03518 808 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 CNGA2Q16280 664 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 ST3GAL2Q16842 350 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 SPRED3Q2MJR0 410 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 TBC1D10BQ4KMP7 808 aaPredicted RBP4.21□□□□□ -1.74
SCN1A-214ENST00000637038 EPC2Q52LR7 807 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 CENPUQ71F23 418 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 POMGNT1Q8WZA1 660 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 LENG9Q96B70 501 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 SLX1AQ9BQ83 275 aa4.21□□□□□ -1.74
SCN1A-214ENST00000637038 FRMD8P1Q9BZ68 369 aaPredicted RBP4.21□□□□□ -1.74
SCN1A-214ENST00000637038 PITPNM3Q9BZ71 974 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms