RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 ENO2P09104 434 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PRKACBP22694 351 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 MZF1P28698 734 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 FOXN2P32314 431 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PTENP60484 403 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PFKPQ01813 784 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TROAPQ12815 778 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SUZ12Q15022 739 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PPP2R5BQ15173 497 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 MAN2A1Q16706 1144 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EXOC3L4Q17RC7 722 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TMTC4Q5T4D3 741 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 NIPAL1Q6NVV3 410 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 POTEHQ6S545 545 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 RGS9BPQ6ZS82 235 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PDSS2Q86YH6 399 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 C10orf88Q9H8K7 445 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SLCO1B3Q9NPD5 702 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SNX9Q9Y5X1 595 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 RPTORQ8N122 1335 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SIPA1L1O43166 1804 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 A0A0G2JND7 137 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ANKRD34BA5PLL1 514 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 WTIPA6NIX2 430 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RBAK-RBAKDNI3L0D1 243 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PODXLO00592 558 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 KRT2P35908 639 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 DLG1Q12959 904 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TRIP10Q15642 601 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ASTE1Q2TB18 679 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RIPOR1Q6ZS17 1223 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 LPCAT2Q7L5N7 544 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 VASH1Q7L8A9 365 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NET1Q7Z628 596 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 DHDDSQ86SQ9 333 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 AMIGO3Q86WK7 504 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 GRAMD2AQ8IUY3 354 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 THAP11Q96EK4 314 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NEURL2Q9BR09 285 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 HAUS8Q9BT25 410 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ARMT1Q9H993 441 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ARL8BQ9NVJ2 186 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ZDHHC7Q9NXF8 308 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 MOSPD1Q9UJG1 213 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PFASO15067 1338 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NRXN2Q9P2S2 1712 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TSPY2A6NKD2 308 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TRPA1O75762 1119 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TTLL1O95922 423 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TSPY3P0CV98 308 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TSPY8P0CW00 308 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PHKA2P46019 1235 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 STT3AP46977 705 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 DRG2P55039 364 aaKnown RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ATP2C1P98194 919 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TSPY1Q01534 308 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 STK4Q13043 487 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 MOGSQ13724 837 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 CLUL1Q15846 466 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ASIC2Q16515 512 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RTN1Q16799 776 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NAALADL2Q58DX5 795 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TNFAIP8L3Q5GJ75 292 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TTC38Q5R3I4 469 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 C10orf76Q5T2E6 689 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 IL23RQ5VWK5 629 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 DCDC5Q6ZRR9 648 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RAPH1Q70E73 1250 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF804AQ7Z570 1209 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 IFNLR1Q8IU57 520 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ANKMY2Q8IV38 441 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ZSCAN29Q8IWY8 852 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 CENPSQ8N2Z9 138 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 SNX29Q8TEQ0 813 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 C10orf82Q8WW14 230 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 OTUD5Q96G74 571 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 C8orf37Q96NL8 207 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PACSIN1Q9BY11 444 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RNF26Q9BY78 433 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TAS2R1Q9NYW7 299 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PLK2Q9NYY3 685 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NUMBLQ9Y6R0 609 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TBKBP1A7MCY6 615 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 SFI1A8K8P3 1242 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 B2RBV5 119 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 K7EPI3 171 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 KIAA0391O15091 583 aaKnown RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NKRFO15226 690 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 KLRC4O43908 158 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 EDF1O60869 148 aaKnown RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 TM4SF1P30408 202 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 RFC1P35251 1148 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 HOXD13P35453 343 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 GPC3P51654 580 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 KPNA1P52294 538 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms