RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 HLA-DQA2P01906 255 aa18.2■□□□□ 0.5
CACNA1A-215ENST00000635727 NT5DC4Q86YG4 428 aa18.2■□□□□ 0.5
CACNA1A-215ENST00000635727 KCTD10Q9H3F6 313 aa18.2■□□□□ 0.5
CACNA1A-215ENST00000635727 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
CACNA1A-215ENST00000635727 POLR1DQ9Y2S0 133 aa18.2■□□□□ 0.5
CACNA1A-215ENST00000635727 ABCE1P61221 599 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 SCN3BQ9NY72 215 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 CRLS1Q9UJA2 301 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 CLK2P49760 499 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 PPP2R2AP63151 447 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 RNF44Q7L0R7 432 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 KRT20P35900 424 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 HARS2P49590 506 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 POU4F1Q01851 419 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 DIABLOQ9NR28 239 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 PHLPP2Q6ZVD8 1323 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 ZBED6P86452 979 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 STARD3Q14849 445 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 WDR72Q3MJ13 1102 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 PRPF39Q86UA1 669 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 PARP9Q8IXQ6 854 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 TRPC4APQ8TEL6 797 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 MTFMTQ96DP5 389 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 CAAP1Q9H8G2 361 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 GID8Q9NWU2 228 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 FBXL21Q9UKT6 434 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 H2AFYO75367 372 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 NOS3P29474 1203 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 CYP51A1Q16850 503 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 ADGRF4Q8IZF3 695 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 LIMA1Q9UHB6 759 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 SERPINB5P36952 375 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 R3HCC1LQ7Z5L2 792 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 CARD9Q9H257 536 aa18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-215ENST00000635727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 NCAM1P13591 858 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 HNRNPH2P55795 449 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 EML3Q32P44 896 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 FBXO10Q9UK96 956 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 PMPCBO75439 489 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 ASNSP08243 561 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 VSNL1P62760 191 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 RCN1Q15293 331 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 HMGCS2P54868 508 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 CLEC16AQ2KHT3 1053 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 NAGPAQ9UK23 515 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 LOC100653049A0A140TA62 436 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 GMNCA6NCL1 334 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 KRT34O76011 436 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 TAF13Q15543 124 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 CINPQ9BW66 212 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 GOLPH3LQ9H4A5 285 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 HEATR9A2RTY3 570 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 ATMINO43313 823 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 IRAK1BP1Q5VVH5 260 aa18.18■□□□□ 0.5
CACNA1A-215ENST00000635727 CAMK2GQ13555 558 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 COG2Q14746 738 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 MAPRE2Q15555 327 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 EIF2AK1Q9BQI3 630 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 STN1Q9H668 368 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 AMACRQ9UHK6 382 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 STAU1O95793 577 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 DUOXA2Q1HG44 320 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CCSAPQ6IQ19 270 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 NSUN7Q8NE18 718 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 ADI1Q9BV57 179 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 KIAA1586Q9HCI6 787 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 RNF112Q9ULX5 631 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CHMP2BQ9UQN3 213 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 GPD1LQ8N335 351 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CEP95Q96GE4 821 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 COQ7Q99807 217 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CYP4F12Q9HCS2 524 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 IL1RAPL1Q9NZN1 696 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 STOML1Q9UBI4 398 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 ASS1P00966 412 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CCNE1P24864 410 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CNTN1Q12860 1018 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 DYNC1I2Q13409 638 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 RASGRF1Q13972 1273 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CYP21A2P08686 494 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 YWHABP31946 246 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 CCR4P51679 360 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 KIF2BQ8N4N8 673 aa18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 SRPRBQ9Y5M8 271 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-215ENST00000635727 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
CACNA1A-215ENST00000635727 ZNF682O95780 498 aa18.16■□□□□ 0.5
CACNA1A-215ENST00000635727 WEE2P0C1S8 567 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms