RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ATG4AQ8WYN0 398 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 FAM84AQ96KN4 292 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 TARS2Q9BW92 718 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 OSBPL8Q9BZF1 889 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 APOBEC3GQ9HC16 384 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 NRBP2Q9NSY0 501 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PARVAQ9NVD7 372 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 SAMD15Q9P1V8 674 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ANKFY1Q9P2R3 1169 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 TELO2Q9Y4R8 837 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PPME1Q9Y570 386 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PTPRJQ12913 1337 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ADGRA2Q96PE1 1338 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 LTBP3Q9NS15 1303 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 DICER1Q9UPY3 1922 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 IGKV6D-21A0A0A0MT36 114 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 NDC80O14777 642 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ACSL3O95573 720 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 LSM8O95777 96 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 CALB1P05937 261 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ATP4AP20648 1035 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 SLCO1A2P46721 670 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ZNF132P52740 706 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 WNT7BP56706 349 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 SP2Q02086 613 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PPARDQ03181 441 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 LLGL1Q15334 1064 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 SURF1Q15526 300 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 CNGA2Q16280 664 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ANKRD20A8PQ5CZ79 823 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ICE2Q659A1 982 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ZPBP2Q6X784 338 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PHLDB2Q86SQ0 1253 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 PASD1Q8IV76 773 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 BRSK2Q8IWQ3 736 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 RCOR2Q8IZ40 523 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 FEZF2Q8TBJ5 459 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 KIF12Q96FN5 646 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 RBM41Q96IZ5 413 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 ZBTB45Q96K62 511 aaPredicted RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 FAM167AQ96KS9 214 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 CCDC77Q9BR77 488 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 DDX23Q9BUQ8 820 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 HAPLN2Q9GZV7 340 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 CCDC113Q9H0I3 377 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 FBXO40Q9UH90 709 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 R3HDM2Q9Y2K5 976 aaKnown RBP8.56□□□□□ -1.04
GPC3-204ENST00000631057 NUB1Q9Y5A7 615 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 IVNS1ABPQ9Y6Y0 642 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 MCM3APO60318 1980 aa8.56□□□□□ -1.04
GPC3-204ENST00000631057 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 TP73O15350 636 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 ADCY3O60266 1144 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 MMP8P22894 467 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 CHKAP35790 457 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 SSR1P43307 286 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 ALDH5A1P51649 535 aaPredicted RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 TAS2R40P59535 323 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 COPS2P61201 443 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 TAP1Q03518 808 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 MCL1Q07820 350 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 LONRF1Q17RB8 773 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 UBAP2Q5T6F2 1119 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 LRRC38Q5VT99 294 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 IZUMO3Q5VZ72 239 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 SEPT14Q6ZU15 432 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 PIGWQ7Z7B1 504 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 RELL1Q8IUW5 271 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 WDR49Q8IV35 697 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 LRRC34Q8IZ02 419 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 ANKRD35Q8N283 1001 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 UBR7Q8N806 425 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 DYDC1Q8WWB3 177 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 CCT6BQ92526 530 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 ARHGEF2Q92974 986 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 KLRG1Q96E93 195 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 HERPUD2Q9BSE4 406 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 HEMGNQ9BXL5 484 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 MRPL4Q9BYD3 311 aaKnown RBP8.55□□□□□ -1.04
GPC3-204ENST00000631057 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 NINJ2Q9NZG7 142 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 LGALS13Q9UHV8 139 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 NEU2Q9Y3R4 380 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 PPP2R3BQ9Y5P8 575 aa8.55□□□□□ -1.04
GPC3-204ENST00000631057 GSTTP1A0A1W2PQM5 241 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 CCT8L1PA6NM43 557 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 FZD9O00144 591 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 GAS2O43903 313 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 MAFO75444 373 aaPredicted RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 TJP3O95049 919 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 GSTA1P08263 222 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 CFHP08603 1231 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms