RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	SLC9A2	Q9UBY0	812 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	TRIM33	Q9UPN9	1127 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	STK38L	Q9Y2H1	464 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	NUB1	Q9Y5A7	615 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ACTL7B	Q9Y614	415 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	FAM47DP	A6NHR8	397 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	LIAS	O43766	372 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	KRT16	P08779	473 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ETS1	P14921	441 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	POLG	P54098	1239 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	WDR4	P57081	412 aa	Known RBP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ACTR2	P61160	394 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	FASTKD3	Q14CZ7	662 aa	Known RBP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	MAML1	Q92585	1016 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	CFAP57	Q96MR6	1250 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	PARVA	Q9NVD7	372 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	POC1B-GALNT4	F8VUJ3	575 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	CETN2	P41208	172 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	NOP14	P78316	857 aa	Known RBP	18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	IL9R	Q01113	521 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	DHX37	Q8IY37	1157 aa	Known RBP	18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	TTLL6	Q8N841	843 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	AGAP11	Q8TF27	550 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	PRCC	Q92733	491 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	THOC1	Q96FV9	657 aa	Known RBP	18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	DOCK5	Q9H7D0	1870 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	KIAA1217	Q5T5P2	1943 aa		18.77	■□□□□ 0.6
CDK16-223	ENST00000622098	LRRIQ4	A6NIV6	560 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098		H0YCG3	227 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	MAFG	O15525	162 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	RPSA	P08865	295 aa	Known RBP	18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	ARSE	P51690	589 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	EMC2	Q15006	297 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	SEZ6	Q53EL9	994 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	SCARA3	Q6AZY7	606 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	XRRA1	Q6P2D8	792 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	AGBL3	Q8NEM8	1001 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	HAUS1	Q96CS2	278 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.77	■□□□□ 0.59
CDK16-223	ENST00000622098	RGPD4	Q7Z3J3	1758 aa		18.77	■□□□□ 0.59
CDK16-223	ENST00000622098		A8MUI8	341 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	KRT1	P04264	644 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	GCA	P28676	217 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	LMNB2	Q03252	620 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	C1QBP	Q07021	282 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	GPS1	Q13098	491 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	SNRNP48	Q6IEG0	339 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	MFSD7	Q6UXD7	560 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ECHDC2	Q86YB7	292 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	OR5B17	Q8NGF7	314 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ACSF2	Q96CM8	615 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	SLITRK1	Q96PX8	696 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	KIF9	Q9HAQ2	790 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	IP6K2	Q9UHH9	426 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	DNALI1	O14645	258 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ABHD2	P08910	425 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	HARS	P12081	509 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	PECAM1	P16284	738 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	TRABD2A	Q86V40	505 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	MRRF	Q96E11	262 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ZBED3	Q96IU2	234 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	MSTO1	Q9BUK6	570 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	TARS2	Q9BW92	718 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	MYOZ2	Q9NPC6	264 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ZNRF3	Q9ULT6	936 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	IVNS1ABP	Q9Y6Y0	642 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	ARID2	Q68CP9	1835 aa		18.76	■□□□□ 0.59
CDK16-223	ENST00000622098	DNAJC3	Q13217	504 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ABHD15	Q6UXT9	468 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	RCOR2	Q8IZ40	523 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	RIBC1	Q8N443	379 aa	Predicted RBP	18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	NSUN6	Q8TEA1	469 aa	Known RBP	18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	SPOCK2	Q92563	424 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ADAM33	Q9BZ11	813 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ARHGEF3	Q9NR81	526 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098		K7ERI5	159 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	TJP3	O95049	919 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	MYO1E	Q12965	1108 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	NIM1K	Q8IY84	436 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ANKLE1	Q8NAG6	615 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ASAP3	Q8TDY4	903 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ZNF606	Q8WXB4	792 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	RBM41	Q96IZ5	413 aa	Known RBP	18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	TEPSIN	Q96N21	525 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	MCEE	Q96PE7	176 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	FBXO40	Q9UH90	709 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	STYXL1	Q9Y6J8	313 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	UTRN	P46939	3433 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098		F8VP50	259 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	KRT15	P19012	456 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	MMP8	P22894	467 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	CXCL9	Q07325	125 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	XKR3	Q5GH77	459 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	RNF43	Q68DV7	783 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	DEPTOR	Q8TB45	409 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	CCHCR1	Q8TD31	782 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	FOXP3	Q9BZS1	431 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	VPS37B	Q9H9H4	285 aa		18.75	■□□□□ 0.59
CDK16-223	ENST00000622098	ASMTL	O95671	621 aa		18.74	■□□□□ 0.59
CDK16-223	ENST00000622098	TBXAS1	P24557	533 aa	Predicted RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms