RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	HSPBAP1	Q96EW2	488 aa		5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	ZNF764	Q96H86	408 aa	Predicted RBP	5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	TRIB1	Q96RU8	372 aa		5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	GTPBP4	Q9BZE4	634 aa	Known RBP	5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	SIDT1	Q9NXL6	827 aa	Known RBP	5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	ABCF2	Q9UG63	623 aa		5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	AGAP1	Q9UPQ3	857 aa		5.75	□□□□□ -1.49
BRCA1-229	ENST00000621897	YY2	O15391	372 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	PEX1	O43933	1283 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	MATN4	O95460	622 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	ANXA1	P04083	346 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	SMARCA1	P28370	1054 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	FOLR3	P41439	243 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	MAP2K6	P52564	334 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	ZNF135	P52742	658 aa	Predicted RBP	5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	HK3	P52790	923 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	POU6F2	P78424	691 aa	Predicted RBP	5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	EXOSC10	Q01780	885 aa	Known RBP	5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	PIGF	Q07326	219 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	PREPL	Q4J6C6	727 aa	Predicted RBP	5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	KIAA0895L	Q68EN5	471 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	HEATR3	Q7Z4Q2	680 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	PDSS2	Q86YH6	399 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	AOPEP	Q8N6M6	819 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	CAGE1	Q8TC20	777 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	SCAMP4	Q969E2	229 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	BRD9	Q9H8M2	597 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	ETAA1	Q9NY74	926 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	POLH	Q9Y253	713 aa		5.74	□□□□□ -1.49
BRCA1-229	ENST00000621897	POLRMT	O00411	1230 aa	Known RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	PROM1	O43490	865 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	FTL	P02792	175 aa	Predicted RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	PPP3CB	P16298	524 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	IBSP	P21815	317 aa	Predicted RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	FBL	P22087	321 aa	Known RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	CYP2C19	P33261	490 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	PIK3CG	P48736	1102 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	SLC30A10	Q6XR72	485 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	FAM177A1	Q8N128	213 aa	Predicted RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	BOLL	Q8N9W6	283 aa	Known RBP	5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	MYCBPAP	Q8TBZ2	947 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	POC1B	Q8TC44	478 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	STAG1	Q8WVM7	1258 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	TFAP2B	Q92481	460 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	SNX19	Q92543	992 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	HOOK2	Q96ED9	719 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	SMO	Q99835	787 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	DUSP26	Q9BV47	211 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	SMOC2	Q9H3U7	446 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	GPR35	Q9HC97	309 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	KIAA1586	Q9HCI6	787 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	RLIM	Q9NVW2	624 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	PTGFRN	Q9P2B2	879 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	IP6K2	Q9UHH9	426 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	NEU2	Q9Y3R4	380 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	COX11	Q9Y6N1	276 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	SPATA31A6	Q5VVP1	1343 aa		5.73	□□□□□ -1.49
BRCA1-229	ENST00000621897	DTNB	O60941	627 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	C1QL1	O75973	258 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	GNAI3	P08754	354 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	MAPK10	P53779	464 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	GNAI1	P63096	354 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	KIF22	Q14807	665 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	MICALCL	Q6ZW33	695 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	PEG10	Q86TG7	708 aa	Known RBP	5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	PPP1R3B	Q86XI6	285 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	SH2D3C	Q8N5H7	860 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	TOR1AIP2	Q8NFQ8	470 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	FBXL20	Q96IG2	436 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	LRFN3	Q9BTN0	628 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	MRPL46	Q9H2W6	279 aa	Known RBP	5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	RSAD1	Q9HA92	442 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	IL17RB	Q9NRM6	502 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	AASDHPPT	Q9NRN7	309 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	GNL3L	Q9NVN8	582 aa	Known RBP	5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	CFAP97	Q9P2B7	532 aa		5.72	□□□□□ -1.49
BRCA1-229	ENST00000621897	VWC2L	B2RUY7	222 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897		E7ENX8	843 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	SLC16A6	O15403	523 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	MPPED1	O15442	326 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	KIF20A	O95235	890 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	AHSG	P02765	367 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	CHRM2	P08172	466 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	ELFN1	P0C7U0	828 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	FTH1P19	P0C7X4	201 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	PF4V1	P10720	104 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	CHRM3	P20309	590 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	NPTX2	P47972	431 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	CACNA2D1	P54289	1103 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	TAP2	Q03519	686 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	HABP2	Q14520	560 aa	Predicted RBP	5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	HLX	Q14774	488 aa	Predicted RBP	5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	PGS1	Q32NB8	556 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	THEMIS2	Q5TEJ8	643 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	TAF2	Q6P1X5	1199 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	TNPO1	Q92973	898 aa	Known RBP	5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	KLK15	Q9H2R5	256 aa		5.71	□□□□□ -1.5
BRCA1-229	ENST00000621897	WDCP	Q9H6R7	721 aa		5.71	□□□□□ -1.5

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