RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SP100P23497 879 aaPredicted RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 BMT2Q1RMZ1 405 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 MGAT5BQ3V5L5 792 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 PHLDB3Q6NSJ2 640 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SLFN11Q7Z7L1 901 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SPATA24Q86W54 205 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 CACUL1Q86Y37 369 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 AGR3Q8TD06 166 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 CPA5Q8WXQ8 436 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 KRT35Q92764 455 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ACAP3Q96P50 834 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 AGPAT1Q99943 283 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 LRRC4CQ9HCJ2 640 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ACP6Q9NPH0 428 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 HAUS2Q9NVX0 235 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 DDX20Q9UHI6 824 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 MYO7AQ13402 2215 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 H0YGN5 161 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 TOM1L1O75674 476 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SHBGP04278 402 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SDC4P31431 198 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 MARCKSL1P49006 195 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 PMS2P54278 862 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 DLG4P78352 724 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 JAG1P78504 1218 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 THOC5Q13769 683 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 KIAA1755Q5JYT7 1200 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 DCAF12L1Q5VU92 463 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 FGD4Q96M96 766 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ZCWPW1Q9H0M4 648 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 TUFT1Q9NNX1 390 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 STXBP5LQ9Y2K9 1186 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 NFS1Q9Y697 457 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 COL24A1Q17RW2 1714 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 PQBP1O60828 265 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 VTNP04004 478 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 POU5F1BQ06416 359 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 PRPSAP1Q14558 356 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 RASGEF1CQ8N431 466 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 CRYGNQ8WXF5 182 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SEC16BQ96JE7 1060 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 CARD9Q9H257 536 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 HACD3Q9P035 362 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 COG5Q9UP83 839 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 WNT10BO00744 389 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 OPLAHO14841 1288 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ECEL1O95672 775 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 KCNJ1P48048 391 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 PTENP60484 403 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 DGKZQ13574 1117 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SLC29A2Q14542 456 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CCDC38Q502W7 563 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ANGPTL8Q6UXH0 198 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 URGCPQ8TCY9 931 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TRAPPC12Q8WVT3 735 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CDKL2Q92772 493 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 KAT5Q92993 513 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 OPTNQ96CV9 577 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 UNC45AQ9H3U1 944 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ZMYM2Q9UBW7 1377 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM47DPA6NHR8 397 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TRAPPC3O43617 180 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 LDHAP00338 332 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SFNP31947 248 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CAP2P40123 477 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SATB1Q01826 763 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TNFAIP2Q03169 654 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 XKR3Q5GH77 459 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 AGBL2Q5U5Z8 902 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 HIPK4Q8NE63 616 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 C1orf54Q8WWF1 131 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CBWD1Q9BRT8 395 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 WRAP73Q9P2S5 460 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 DDX3YO15523 660 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ATP9BO43861 1147 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 NPTXRO95502 500 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 MMEP08473 750 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CETPP11597 493 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 COMTP21964 271 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 PHBP35232 272 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 PCK1P35558 622 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TCF7P36402 384 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CNTN2Q02246 1040 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 KRT39Q6A163 491 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 KCNV1Q6PIU1 500 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CCDC137Q6PK04 289 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ARHGEF19Q8IW93 802 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 RHOT2Q8IXI1 618 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 EIF1ADQ8N9N8 165 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 UBA3Q8TBC4 463 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 FBXO41Q8TF61 875 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms