RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PCDHA7Q9UN72 937 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 YIPF1Q9Y548 306 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 TSC2P49815 1807 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 H0Y858 1186 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 STK25O00506 426 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 GARTP22102 1010 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 TAF6P49848 677 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 MRE11P49959 708 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 CDR1P51861 262 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 NUBP1P53384 320 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 ASIC1P78348 528 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 DNM1Q05193 864 aaKnown RBP18.56■□□□□ 0.56
HMGN3-203ENST00000620514 DUSP4Q13115 394 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 GPR17Q13304 367 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 IQUBQ8NA54 791 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 OR10T2Q8NGX3 314 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 KCNG4Q8TDN1 519 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
HMGN3-203ENST00000620514 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 PYM1Q9BRP8 204 aaKnown RBP18.56■□□□□ 0.56
HMGN3-203ENST00000620514 OXCT2Q9BYC2 517 aaPredicted RBP18.56■□□□□ 0.56
HMGN3-203ENST00000620514 CUEDC2Q9H467 287 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 TBC1D17Q9HA65 648 aa18.56■□□□□ 0.56
HMGN3-203ENST00000620514 MTMR11A4FU01 709 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 CYB561D2O14569 222 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 POLR2DO15514 142 aaKnown RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 CYP11A1P05108 521 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 PDIA4P13667 645 aaKnown RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 PAX3P23760 479 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 CASP1P29466 404 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 HOXD13P35453 343 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 ME1P48163 572 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 TFAMQ00059 246 aaKnown RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 MYBPC2Q14324 1141 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 ELMOD1Q8N336 334 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 TTC9BQ8N6N2 239 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 ATAD1Q8NBU5 361 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 ZNF512Q96ME7 567 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 RTP3Q9BQQ7 232 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 PLA2G2FQ9BZM2 168 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 LRRC27Q9C0I9 530 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 TMEM206Q9H813 350 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 ARHGEF3Q9NR81 526 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 RBAKQ9NYW8 714 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-203ENST00000620514 GDE1Q9NZC3 331 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 SLC27A5Q9Y2P5 690 aa18.55■□□□□ 0.56
HMGN3-203ENST00000620514 PIEZO1Q92508 2521 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 EXTL3O43909 919 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 MOSPD3O75425 235 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 SOAT2O75908 522 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 LDHAP00338 332 aaKnown RBP18.54■□□□□ 0.56
HMGN3-203ENST00000620514 MYL4P12829 197 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 GJA1P17302 382 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 AMPD3Q01432 767 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 CYP4A22Q5TCH4 519 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 WSCD1Q658N2 575 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 TANGO2Q6ICL3 276 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 IQCEQ6IPM2 695 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 CENPPQ6IPU0 288 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 ARMCX5Q6P1M9 558 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 ATOH1Q92858 354 aaPredicted RBP18.54■□□□□ 0.56
HMGN3-203ENST00000620514 C7orf25Q9BPX7 421 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 BLZF1Q9H2G9 400 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 CACNA1HO95180 2353 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 COL4A3Q01955 1670 aa18.54■□□□□ 0.56
HMGN3-203ENST00000620514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.53■□□□□ 0.56
HMGN3-203ENST00000620514 ZNF197O14709 1029 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 RFX1P22670 979 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 POLR2BP30876 1174 aaKnown RBP18.53■□□□□ 0.56
HMGN3-203ENST00000620514 RESP18Q5W5W9 173 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 CNNM4Q6P4Q7 775 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 NT5DC4Q86YG4 428 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 C1orf127Q8N9H9 656 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 CHAMP1Q96JM3 812 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 ZSWIM3Q96MP5 696 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 ZCWPW1Q9H0M4 648 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 AGAP1Q9UPQ3 857 aa18.53■□□□□ 0.56
HMGN3-203ENST00000620514 KPNA7A9QM74 516 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 ECI2O75521 394 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 ITGB3P05106 788 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 FCARP24071 287 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 EPHA5P54756 1037 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.56
HMGN3-203ENST00000620514 SV2CQ496J9 727 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 SLC39A12Q504Y0 691 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 FAM78AQ5JUQ0 283 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 FAM26FQ5R3K3 315 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 LMBRD2Q68DH5 695 aaPredicted RBP18.52■□□□□ 0.56
HMGN3-203ENST00000620514 ATL3Q6DD88 541 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 STXBP4Q6ZWJ1 553 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 EPM2AIP1Q7L775 607 aaPredicted RBP18.52■□□□□ 0.56
HMGN3-203ENST00000620514 METTL23Q86XA0 190 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 CCDC105Q8IYK2 499 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 GPD1LQ8N335 351 aa18.52■□□□□ 0.56
HMGN3-203ENST00000620514 CXorf38Q8TB03 319 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms