RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLC7A14Q8TBB6 771 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 PIDD1Q9HB75 910 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 PDE11AQ9HCR9 933 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 CLUHO75153 1309 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 MED19A0JLT2 244 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-228ENST00000618469 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 PIRO00625 290 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 SPTLC1O15269 473 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 LILRA4P59901 499 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
BRCA1-228ENST00000618469 LMBRD2Q68DH5 695 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-228ENST00000618469 USP37Q86T82 979 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 CCDC47Q96A33 483 aaKnown RBP17.27■□□□□ 0.36
BRCA1-228ENST00000618469 PRKD2Q9BZL6 878 aa17.27■□□□□ 0.36
BRCA1-228ENST00000618469 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF233A6NK53 670 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 CCL16O15467 120 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 TBC1D4O60343 1298 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 ITGB3P05106 788 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 TMEM191BP0C7N4 346 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 CPB1P15086 417 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 POLR2BP30876 1174 aaKnown RBP17.26■□□□□ 0.35
BRCA1-228ENST00000618469 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
BRCA1-228ENST00000618469 TAF6P49848 677 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 DPYDQ12882 1025 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 PSMD2Q13200 908 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
BRCA1-228ENST00000618469 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
BRCA1-228ENST00000618469 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 MTMR12Q9C0I1 747 aa17.26■□□□□ 0.35
BRCA1-228ENST00000618469 PTPRJQ12913 1337 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 HNRNPA1P09651 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 NPR3P17342 541 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 TYMPP19971 482 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 HOXA9P31269 272 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 CLCN5P51795 746 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 SNRPFP62306 86 aaKnown RBP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 ANGPT1Q15389 498 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 SV2CQ496J9 727 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 OVOS1Q6IE37 1185 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 XXYLT1Q8NBI6 393 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 RDH13Q8NBN7 331 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 CACTINQ8WUQ7 758 aaKnown RBP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 ANKRD36BP1Q96IX9 119 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 KIAA1586Q9HCI6 787 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 WDR6Q9NNW5 1121 aaKnown RBP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
BRCA1-228ENST00000618469 POLIQ9UNA4 740 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 USTQ9Y2C2 406 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 GVINP1Q7Z2Y8 2422 aa17.25■□□□□ 0.35
BRCA1-228ENST00000618469 ARHGEF37A1IGU5 675 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 PRRG1O14668 218 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 XYLBO75191 536 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 OAZ2O95190 189 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 PAPLNO95428 1278 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 KRT19P08727 400 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 OR4Q2P0C623 313 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 PAX3P23760 479 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 ELF1P32519 619 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 PNPLA4P41247 253 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 FAM160A1Q05DH4 1040 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 SURF1Q15526 300 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 GET4Q7L5D6 327 aaPredicted RBP17.24■□□□□ 0.35
BRCA1-228ENST00000618469 OTOP3Q7RTS5 596 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 C12orf56Q8IXR9 622 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
BRCA1-228ENST00000618469 RMDN1Q96DB5 314 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 FBXL21Q9UKT6 434 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 AGAP1Q9UPQ3 857 aa17.24■□□□□ 0.35
BRCA1-228ENST00000618469 WDR87Q6ZQQ6 2873 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 OR6C75A6NL08 312 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 STK25O00506 426 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 CYB561D2O14569 222 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 NARSO43776 548 aaKnown RBP17.23■□□□□ 0.35
BRCA1-228ENST00000618469 EXOC3O60645 756 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 ABLIM3O94929 683 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 TNNC2P02585 160 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
BRCA1-228ENST00000618469 ATF2P15336 505 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 GBP2P32456 591 aaPredicted RBP17.23■□□□□ 0.35
BRCA1-228ENST00000618469 CYP24A1Q07973 514 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 BFSP1Q12934 665 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 PNOCQ13519 176 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 TPGS2Q68CL5 300 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 GRASPQ7Z6J2 395 aaPredicted RBP17.23■□□□□ 0.35
BRCA1-228ENST00000618469 WDR49Q8IV35 697 aa17.23■□□□□ 0.35
BRCA1-228ENST00000618469 ZDHHC14Q8IZN3 488 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms