RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TTLL1O95922 423 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 ALOX15P16050 662 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF846Q147U1 533 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 KBTBD2Q8IY47 623 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 ASNSD1Q9NWL6 643 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 EHD3Q9NZN3 535 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 TPRKBQ9Y3C4 175 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 UBXN8O00124 270 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 CCDC166P0CW27 439 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ABCB10Q9NRK6 738 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ZFYVE9O95405 1425 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 MATN2O00339 956 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 PLCG1P19174 1290 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SPICE1Q8N0Z3 855 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 POLG2Q9UHN1 485 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ARHGEF33A8MVX0 844 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 RPS6KA3P51812 740 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ARPP19P56211 112 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC41Q15345 812 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC4Q9HBW1 653 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 KRCC1Q9NPI7 259 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 BFARQ9NZS9 450 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 IP6K2Q9UHH9 426 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 NUP50Q9UKX7 468 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ACLYP53396 1101 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SLC16A1P53985 500 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SLC29A2Q14542 456 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SNX17Q15036 470 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 PERM1Q5SV97 790 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ARL6IP4Q66PJ3 421 aaKnown RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 CLHC1Q8NHS4 586 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 RFFLQ8WZ73 363 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 PCMTD2Q9NV79 361 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 TAGLN3Q9UI15 199 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 A0A1W2PQ72 361 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 MMP1P03956 469 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 STXBP2Q15833 593 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ANKMY2Q8IV38 441 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 OR2W6PQ8NHA6 318 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 RFT1Q96AA3 541 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 PCP11498 1178 aaKnown RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 TUFMP49411 452 aaKnown RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 ALCAMQ13740 583 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 KNOP1Q1ED39 458 aaKnown RBP15.66■□□□□ 0.1
COL5A1-208ENST00000618395 FUKQ8N0W3 1084 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 DPP10Q8N608 796 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 DBNDD2Q9BQY9 259 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 CHKBQ9Y259 395 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 SLC25A24Q6NUK1 477 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 C3orf62Q6ZUJ4 267 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 NDUFAF2Q8N183 169 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 C1orf54Q8WWF1 131 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 IFT43Q96FT9 208 aa15.66■□□□□ 0.1
COL5A1-208ENST00000618395 AMER2Q8N7J2 671 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 TSPAN17Q96FV3 270 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 A0A0D9SFI3 127 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 EYA2O00167 538 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 RFX1P22670 979 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 KCNMA1Q12791 1236 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 FASP25445 335 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 SERPINB5P36952 375 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 PPARAQ07869 468 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 SLC9A2Q9UBY0 812 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 AK5Q9Y6K8 562 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 BLMP54132 1417 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 POTECB2RU33 542 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 APOA4P06727 396 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 CDC25CP30307 473 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 RRM2P31350 389 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 GSTA3Q16772 222 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 TTC29Q8NA56 475 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 NSUN7Q8NE18 718 aaKnown RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 DYRK4Q9NR20 520 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 CACTIN-AS1Q8N1I8 211 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 SARS2Q9NP81 518 aaKnown RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 PCDH12Q9NPG4 1184 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 A0A1W2PQC6 194 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 SEC24AO95486 1093 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 PGBD2Q6P3X8 592 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 TPTE2Q6XPS3 522 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 EIF3MQ7L2H7 374 aaKnown RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 PRRG3Q9BZD7 231 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 MYLK2Q9H1R3 596 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 SOX11P35716 441 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 EIF3EP60228 445 aaKnown RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 C5orf22Q49AR2 442 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 ARID3BQ8IVW6 561 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-208ENST00000618395 CLIC5Q9NZA1 410 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF221Q9UK13 617 aa15.65■□□□□ 0.1
COL5A1-208ENST00000618395 GPC6Q9Y625 555 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms