RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 AGBL1Q96MI9 1066 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ADCY3O60266 1144 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 OR1G1P47890 313 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TTLL9Q3SXZ7 439 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TRIM69Q86WT6 500 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DDX28Q9NUL7 540 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TCP11X1B4DZS4 312 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DCAF6Q58WW2 860 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CINPQ9BW66 212 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 PSMC3IPQ9P2W1 217 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 H2AFYO75367 372 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TRIP4Q15650 581 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SMAD1Q15797 465 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DNAL1Q4LDG9 190 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CDR2LQ86X02 465 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 KIAA2013Q8IYS2 634 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 STAMBPL1Q96FJ0 436 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TRABDQ9H4I3 376 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 PAPOLBQ9NRJ5 636 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 RIC8BQ9NVN3 520 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CYP26A1O43174 497 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 ATP1A1P05023 1023 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 USP10Q14694 798 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 APPL1Q9UKG1 709 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 MYO1CO00159 1063 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 ENO1P06733 434 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 PNPLA4P41247 253 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 MRPL48Q96GC5 212 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 IPPQ9Y573 584 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CRB1P82279 1406 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DDHD2O94830 711 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC25A27O95847 323 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 FGFR4P22455 802 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 CNOT7Q9UIV1 285 aaKnown RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 C2orf81A6NN90 581 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 H7C4K7 107 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 HMBSP08397 361 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM200BP0CF97 657 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 FHOD1Q9Y613 1164 aa11.67□□□□□ -0.54
CCDC144B-208ENST00000618081 TK2O00142 265 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 PHF2O75151 1096 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 PDGFRAP16234 1089 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 CNTN1Q12860 1018 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ZRANB3Q5FWF4 1079 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 HEATR9A2RTY3 570 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 SEC24DO94855 1032 aaPredicted RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 CTSHP09668 335 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 C10orf120Q5SQS8 335 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 VPS50Q96JG6 964 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 GOLPH3Q9H4A6 298 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ENTPD7Q9NQZ7 604 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ZW10O43264 779 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 PGK2P07205 417 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 KDSRQ06136 332 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 KLHL2O95198 593 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 CETPP11597 493 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 EFHC1Q5JVL4 640 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 EME1Q96AY2 570 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 NPHS2Q9NP85 383 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 PAK5Q9P286 719 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 PRG3Q9Y2Y8 225 aaPredicted RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 GAS2O43903 313 aaKnown RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ACOT2P49753 483 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 NCAM1P13591 858 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 RAD23BP54727 409 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 DEFA1P59665 94 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 DEFA3P59666 94 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 UBE3AQ05086 875 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 BYSLQ13895 437 aaKnown RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ANGPT1Q15389 498 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms