RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 SDCBP2Q9H190 292 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
PDPN-211ENST00000617617 VWA8A3KMH1 1905 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 CARNS1A5YM72 827 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 CYP26A1O43174 497 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
PDPN-211ENST00000617617 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
PDPN-211ENST00000617617 PDE6CP51160 858 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 LILRA4P59901 499 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 SPA17Q15506 151 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 WDR72Q3MJ13 1102 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
PDPN-211ENST00000617617 RBBP8NLQ8NC74 664 aaPredicted RBP12.55□□□□□ -0.4
PDPN-211ENST00000617617 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 POLIQ9UNA4 740 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 PCDHA13Q9Y5I0 950 aa12.55□□□□□ -0.4
PDPN-211ENST00000617617 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 KIF2AO00139 706 aaPredicted RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 AKR1B10O60218 316 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 IPO7O95373 1038 aaKnown RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 FMO1Q01740 532 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 IKBKEQ14164 716 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 TMEM86AQ8N2M4 240 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 TMEM199Q8N511 208 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 TMEM175Q9BSA9 504 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 DNAI2Q9GZS0 605 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 A0A087X0T9 212 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 A0A0A6YYK5 440 aaPredicted RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 M0QZQ0 153 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 PODXLO00592 558 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 PPEF2O14830 753 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 CYP1A1P04798 512 aaPredicted RBP12.54□□□□□ -0.4
PDPN-211ENST00000617617 CYP11A1P05108 521 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 FAM228BP0C875 321 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 ARHGAP25P42331 645 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 SCNN1GP51170 649 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 SLC47A2Q86VL8 602 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 SCLYQ96I15 445 aa12.54□□□□□ -0.4
PDPN-211ENST00000617617 GABRDO14764 452 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
PDPN-211ENST00000617617 RAD23BP54727 409 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 STILQ15468 1287 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 ZNF518BQ9C0D4 1074 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 SMYD3Q9H7B4 428 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 TNFAIP3P21580 790 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 CRYBG2Q8N1P7 616 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 LHX5Q9H2C1 402 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 IL23AQ9NPF7 189 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 NCANO14594 1321 aa12.53□□□□□ -0.4
PDPN-211ENST00000617617 SPTLC1O15269 473 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 KRT5P13647 590 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 EN2P19622 333 aaPredicted RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 CCL23P55773 120 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 PPP1R12CQ9BZL4 782 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 RC3H2Q9HBD1 1191 aaKnown RBP12.52□□□□□ -0.4
PDPN-211ENST00000617617 DSEQ9UL01 958 aa12.52□□□□□ -0.4
PDPN-211ENST00000617617 USP27XA6NNY8 438 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 MED7O43513 233 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 RTN2O75298 545 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 VDRP11473 427 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 TYMPP19971 482 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 GNA15P30679 374 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.41
PDPN-211ENST00000617617 CENPCQ03188 943 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 ARID5AQ03989 594 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 CLEC16AQ2KHT3 1053 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.41
PDPN-211ENST00000617617 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
PDPN-211ENST00000617617 NXF1Q9UBU9 619 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms