RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ALCAMQ13740 583 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 PTPAQ15257 358 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 ZNF720Q7Z2F6 126 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 KIAA2013Q8IYS2 634 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 MAML2Q8IZL2 1156 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 SMARCD2Q92925 531 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 IRF7Q92985 503 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 RMDN1Q96DB5 314 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 MTF2Q9Y483 593 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 SCN1AP35498 2009 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 TSC2P49815 1807 aa13.16□□□□□ -0.3
PDLIM2-218ENST00000614502 NCOR2Q9Y618 2525 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 IL18RAPO95256 599 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 MYL4P12829 197 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 ZNF528Q3MIS6 628 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 TANGO2Q6ICL3 276 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 POTEHQ6S545 545 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 ERMP1Q7Z2K6 904 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 ITIH5Q86UX2 942 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 LRRC15Q8TF66 581 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 ASB16Q96NS5 453 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 TRMT61BQ9BVS5 477 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 LTB4R2Q9NPC1 389 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 TRPV5Q9NQA5 729 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 FBXO2Q9UK22 296 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 TICRRQ7Z2Z1 1910 aa13.15□□□□□ -0.3
PDLIM2-218ENST00000614502 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 FAM170BA6NMN3 283 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 PIRO00625 290 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 CYP11A1P05108 521 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 PSMC3P17980 439 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 CD72P21854 359 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 TUFMP49411 452 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 ACOT2P49753 483 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 TAF6P49848 677 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 SV2CQ496J9 727 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 FAM78AQ5JUQ0 283 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 C9orf57Q5W0N0 161 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 TPRG1Q6ZUI0 275 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 MSANTD3Q96H12 275 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 IER2Q9BTL4 223 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 SPATA6Q9NWH7 488 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 CEP72Q9P209 647 aa13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-218ENST00000614502 MED19A0JLT2 244 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 ANKRD63C9JTQ0 380 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 NFICP08651 508 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 PNPLA4P41247 253 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 STAT6P42226 847 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 DUSP4Q13115 394 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 HINFPQ9BQA5 517 aa13.13□□□□□ -0.31
PDLIM2-218ENST00000614502 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms