RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TRIM69Q86WT6 500 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 SERPINB12Q96P63 405 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 ERGIC2Q96RQ1 377 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 NDUFS3O75489 264 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 ACCSLQ4AC99 568 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 SYTL3Q4VX76 610 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 HPS3Q969F9 1004 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 ERP44Q9BS26 406 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 HMGB3O15347 200 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 GAS2O43903 313 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 SF3B3Q15393 1217 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 MEI1Q5TIA1 1274 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 HHIPL2Q6UWX4 724 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 LINC00523Q86TU6 105 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 CCNJLQ8IV13 435 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 USP38Q8NB14 1042 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 RBBP8Q99708 897 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 TRPC5OSA6NMA1 111 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 EXTL3O43909 919 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 OCM2P0CE71 109 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 OCMP0CE72 109 aaPredicted RBP18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 ACADSP16219 412 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 MAGEA4P43358 317 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 PPIL6Q8IXY8 311 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 APRTP07741 180 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 MDH1BQ5I0G3 518 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 SH2D3CQ8N5H7 860 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC40A1Q9NP59 571 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC30A1Q9Y6M5 507 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 KRT75O95678 551 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 VHLP40337 213 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 DCAF4L1Q3SXM0 396 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 WLSQ5T9L3 541 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 DCP1BQ8IZD4 617 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 DAGLBQ8NCG7 672 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 ERP27Q96DN0 273 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 ELMO2Q96JJ3 720 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 TRIM51Q9BSJ1 452 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 ALG13Q9NP73 1137 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 GGT7Q9UJ14 662 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 FHOD1Q9Y613 1164 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 IGSF9BQ9UPX0 1349 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 TXNP10599 105 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 FDFT1P37268 417 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 GRIK1P39086 918 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 MS4A14Q96JA4 679 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 FAR2Q96K12 515 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 NT5C1AQ9BXI3 368 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 PRMT7Q9NVM4 692 aaPredicted RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 IL1RAPL1Q9NZN1 696 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 CRB1P82279 1406 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 PCSK1P29120 753 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 FMR1Q06787 632 aaKnown RBP eCLIP18.2■□□□□ 0.54e-6■■■■□ 22.5
HMGXB3-206ENST00000613459 NAPEPLDQ6IQ20 393 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 NYAP1Q6ZVC0 841 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 TC2NQ8N9U0 490 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 CHP1Q99653 195 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 C10orf88Q9H8K7 445 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 F5H423 210 aaPredicted RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 GH1P01241 217 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 RALBP11234 206 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 VCAM1P19320 739 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 GPD1P21695 349 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 PNPLA4P41247 253 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 EMC2Q15006 297 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 CYGBQ8WWM9 190 aa18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 TMA16Q96EY4 203 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 AFF4Q9UHB7 1163 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-206ENST00000613459 SNAP23O00161 211 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 HNRNPH1P31943 449 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 CLEC4FQ8N1N0 589 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 CARD9Q9H257 536 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 FLT1P17948 1338 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 SPDYE5A6NIY4 337 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 PTGISQ16647 500 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 SPDYE7PQ495Y7 208 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 BBS7Q8IWZ6 715 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 NSL1Q96IY1 281 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 TMEM117Q9H0C3 514 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 ZNF609O15014 1411 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 TMED10P49755 219 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 PKN3Q6P5Z2 889 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 NIF3L1Q9GZT8 377 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 TASP1Q9H6P5 420 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 PIN4Q9Y237 131 aaKnown RBP18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 CFAP99D6REC4 459 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 PSTPIP1O43586 416 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 RPA1P27694 616 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms