RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 A0A0A6YYK5 440 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 LIN7AO14910 233 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 B3GALNT1O75752 331 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 TRPA1O75762 1119 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 MYCLP12524 364 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ANXA13P27216 316 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF157P51786 506 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 BIRC3Q13489 604 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC50Q8IVM0 306 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF653Q96CK0 615 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 MKNK1Q9BUB5 465 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 NUP85Q9BW27 656 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 COL20A1Q9P218 1284 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ITGB1BP2Q9UKP3 347 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 RPTORQ8N122 1335 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 ADRB2P07550 413 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 KRT5P13647 590 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 PPP1R7Q15435 360 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 SNCBQ16143 134 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 GKAP1Q5VSY0 366 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 LRRC34Q8IZ02 419 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 LMO3Q8TAP4 145 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 TBC1D31Q96DN5 1066 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 XPO6Q96QU8 1125 aaKnown RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 STRA6Q9BX79 667 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 TEKT3Q9BXF9 490 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 HEMGNQ9BXL5 484 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 CARD9Q9H257 536 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC5A4Q9NY91 659 aa11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 MRPL11Q9Y3B7 192 aaKnown RBP11.34□□□□□ -0.59
PCDHGC3-202ENST00000611950 CENPFP49454 3210 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMEM247A6NEH6 219 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 BCRP11274 1271 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 MXI1P50539 228 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 UGCGQ16739 394 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM182AQ5T1J6 154 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM102BQ5T8I3 360 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 SEL1L2Q5TEA6 688 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 GDAP1Q8TB36 358 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 SEMA4DQ92854 862 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 MRRFQ96E11 262 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 GMLQ99445 158 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 VCX3BQ9H321 246 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 PCMTD2Q9NV79 361 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 GRHL1Q9NZI5 618 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 HSPBP1Q9NZL4 362 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 NCANO14594 1321 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 A6NHS1 94 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 O00370 1275 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ALAS1P13196 640 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 IDO1P14902 403 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 SPP2Q13103 211 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ANKRD20A8PQ5CZ79 823 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 C6orf89Q6UWU4 347 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 CAPN12Q6ZSI9 719 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZNF564Q8TBZ8 553 aaPredicted RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 DYDC1Q8WWB3 177 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 KREMEN1Q96MU8 473 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZSWIM1Q9BR11 485 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 MRPL46Q9H2W6 279 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 PABPC3Q9H361 631 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 KIAA1522Q9P206 1035 aaPredicted RBP11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 ATP8B3O60423 1300 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 UBE4BO95155 1302 aa11.33□□□□□ -0.6
PCDHGC3-202ENST00000611950 A6NNZ2 444 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 SMIM24O75264 130 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 RARAP10276 462 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLC8A1P32418 973 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 GPC5P78333 572 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 LRP8Q14114 963 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 PASD1Q8IV76 773 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 UBL4BQ8N7F7 174 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHMP6Q96FZ7 201 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 MXRA8Q9BRK3 442 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 ASIC3Q9UHC3 531 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 CCPG1Q9ULG6 757 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 MAFFQ9ULX9 164 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZNF536O15090 1300 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms