RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 KIF20AO95235 890 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 RPLP2P05387 115 aaKnown RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PIM1P11309 404 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PHKG2P15735 406 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TSHRP16473 764 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SMARCA1P28370 1054 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 BUD31P41223 144 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SLC11A2P49281 568 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PRIM2P49643 509 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 ZNF134P52741 427 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 ZNF135P52742 658 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SUMO3P55854 103 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 FAM193AP78312 1265 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 POU6F2P78424 691 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 HSD11B2P80365 405 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 CREMQ03060 361 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 ZNF543Q08ER8 600 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 CTBP1Q13363 440 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 UBE4AQ14139 1066 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 HLTFQ14527 1009 aaKnown RBP eCLIP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 POLD3Q15054 466 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SAFBQ15424 915 aaKnown RBP eCLIP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 CYP2A13Q16696 494 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 ZIK1Q3SY52 487 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SPATS1Q496A3 300 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 C3orf38Q5JPI3 329 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 KHDC1LQ5JSQ8 128 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 MIIPQ5JXC2 388 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 MAPKAPK5Q8IW41 473 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 GSPT2Q8IYD1 628 aaKnown RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TMEM132CQ8N3T6 1108 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 FITM2Q8N6M3 262 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SLC17A8Q8NDX2 589 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 NLGN4YQ8NFZ3 816 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 BRIX1Q8TDN6 353 aaKnown RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PARD3BQ8TEW8 1205 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 FBXO41Q8TF61 875 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 KBTBD7Q8WVZ9 684 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PHKBQ93100 1093 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TRIM43Q96BQ3 446 aaPredicted RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 MSLNLQ96KJ4 702 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 GDF15Q99988 308 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 MLST8Q9BVC4 326 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 IMPG2Q9BZV3 1241 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 DEF6Q9H4E7 631 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 BRD9Q9H8M2 597 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 ALG13Q9NP73 1137 aaKnown RBP2.06□□□□□ -2.08
SNORA28-201ENST00000606769 SLAMF7Q9NQ25 335 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TRPM5Q9NZQ8 1165 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 POGKQ9P215 609 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 PHTF1Q9UMS5 762 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 HDAC5Q9UQL6 1122 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 CDYLQ9Y232 598 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TBC1D30Q9Y2I9 924 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 TCAF1Q9Y4C2 921 aa2.06□□□□□ -2.08
SNORA28-201ENST00000606769 A0A087WZ62 844 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 A0A1W2PPL8 197 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 BTN3A1O00481 513 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 MATN3O15232 486 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 NCK2O43639 380 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 NARSO43776 548 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 PQBP1O60828 265 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 SCAF4O95104 1147 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 SPDEFO95238 335 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 ANXA1P04083 346 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 ERBB2P04626 1255 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 MYL1P05976 194 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 MYL3P08590 195 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 ALAS1P13196 640 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 KRT4P19013 534 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CHRM3P20309 590 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 GATA3P23771 443 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 MGAT1P26572 445 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 SLC7A1P30825 629 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 HNRNPMP52272 730 aaKnown RBP eCLIP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CACNB3P54284 484 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 UCP3P55916 312 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 RHBDL3P58872 404 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 RPS16P62249 146 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CXADRP78310 365 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 SP2Q02086 613 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 HHEXQ03014 270 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 FOXE3Q13461 319 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CNGB1Q14028 1251 aaPredicted RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CNGA2Q16280 664 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 KLHDC7AQ5VTJ3 777 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 TAPT1Q6NXT6 567 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 TAF2Q6P1X5 1199 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 DARS2Q6PI48 645 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 ZDHHC24Q6UX98 284 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 PRRT2Q7Z6L0 340 aaPredicted RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 MRGPREQ86SM8 312 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 GPR149Q86SP6 731 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 GGNQ86UU5 652 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 ZNF280BQ86YH2 543 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 C1orf210Q8IVY1 113 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 FAM109AQ8N4B1 249 aa2.05□□□□□ -2.08
SNORA28-201ENST00000606769 CPEB3Q8NE35 698 aaKnown RBP2.05□□□□□ -2.08
SNORA28-201ENST00000606769 FAM46DQ8NEK8 389 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms