RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ACKR2O00590 384 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ARHGAP6O43182 974 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 HOXC11O43248 304 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SRGAP3O43295 1099 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 TIPRLO75663 272 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ZBTB7AO95365 584 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FTLP02792 175 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FUCA1P04066 466 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 PARP1P09874 1014 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 HNRNPLP14866 589 aaKnown RBP eCLIP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 PI3P19957 117 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SDHAP31040 664 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 GJA4P35212 333 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 KRT20P35900 424 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FNTBP49356 437 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 MAN2A2P49641 1150 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 AFF3P51826 1226 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 NR1H2P55055 460 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 DCAF7P61962 342 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 NKX6-1P78426 367 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 IL10RAQ13651 578 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 TRIM25Q14258 630 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FGL2Q14314 439 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SSPNQ14714 243 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 TMEM132BQ14DG7 1078 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 GPR162Q16538 588 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FIGNQ5HY92 759 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 CATSPEREQ5SY80 951 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 FAM205BPQ63HN1 556 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 RTN4RL1Q86UN2 441 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 LRRTM4Q86VH4 590 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 CPOQ8IVL8 374 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 CCDC33Q8N5R6 958 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 NUP43Q8NFH3 380 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 UHMK1Q8TAS1 419 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SEC14L1Q92503 715 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 KAT5Q92993 513 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SHISA4Q96DD7 197 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 PAWRQ96IZ0 340 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 NUDT16L1Q9BRJ7 211 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 LSM14BQ9BX40 385 aaKnown RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SGPP1Q9BX95 441 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 AP5M1Q9H0R1 490 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 KCTD10Q9H3F6 313 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ARMT1Q9H993 441 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ZNF287Q9HBT7 754 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 KCNH7Q9NS40 1196 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 GJB4Q9NTQ9 266 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 SIRT5Q9NXA8 310 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 EBF1Q9UH73 591 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 MBD1Q9UIS9 605 aaPredicted RBP4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 NUDT5Q9UKK9 219 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ITGB1BP2Q9UKP3 347 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 ROCK1Q13464 1354 aa4.47□□□□□ -1.69
IGHV3-29-201ENST00000604817 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.69
IGHV3-29-201ENST00000604817 FMN2Q9NZ56 1722 aa4.46□□□□□ -1.69
IGHV3-29-201ENST00000604817 A0A087X0M5 115 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 A0A1B0GX30 115 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 F5H0A9 414 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 SLC16A6O15403 523 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 PSPNO60542 156 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 ADRB1P08588 477 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 PNLIPP16233 465 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 PRKCAP17252 672 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 XPAP23025 273 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 FPR2P25090 351 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CTSSP25774 331 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 LGALS4P56470 323 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 HTRA4P83105 476 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CYP4F8P98187 520 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CDK17Q00537 523 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 MVKQ03426 396 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 GRM1Q13255 1194 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CNGA2Q16280 664 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CCNG2Q16589 344 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 ADGRF1Q5T601 910 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 NLRX1Q86UT6 975 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 MOGAT3Q86VF5 341 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 TRIM48Q8IWZ4 208 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 TCP11L2Q8N4U5 519 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 HERVK_113Q902F9 699 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 ZNF566Q969W8 418 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 DACT3Q96B18 629 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 RGMAQ96B86 450 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 HVCN1Q96D96 273 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 MAML3Q96JK9 1138 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 MAELQ96JY0 434 aaKnown RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 MSLNLQ96KJ4 702 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 TREX2Q9BQ50 279 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 CNPPD1Q9BV87 410 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 PDGFDQ9GZP0 370 aaPredicted RBP4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 WNT8AQ9H1J5 351 aa4.46□□□□□ -1.7
IGHV3-29-201ENST00000604817 BRD9Q9H8M2 597 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms