RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 KRT23Q9C075 422 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 EBF2Q9HAK2 575 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 NDFIP2Q9NV92 336 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM153AQ9UHL3 310 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MOSPD1Q9UJG1 213 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CPSF3Q9UKF6 684 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MTUS1Q9ULD2 1270 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 AFF2P51816 1311 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TTC41PQ6P2S7 1318 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 WDR19Q8NEZ3 1342 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 C10orf71Q711Q0 1435 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 WNK3Q9BYP7 1800 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM247A6NEH6 219 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 POTECB2RU33 542 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 BACH1O14867 736 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 GFRA3O60609 400 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CPNE3O75131 537 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 SMIM24O75264 130 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 SNRNP70P08621 437 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 HSPA8P11142 646 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ACTN1P12814 892 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ADCYAP1R1P41586 468 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 OR1G1P47890 313 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 C1QTNF8P60827 252 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MAP7Q14244 749 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 GEN1Q17RS7 908 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 LONRF2Q1L5Z9 754 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 USP51Q70EK9 711 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 REXO1Q8N1G1 1221 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CAMKK1Q8N5S9 505 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF527Q8NB42 609 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 DIS3LQ8TF46 1054 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 OPTNQ96CV9 577 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 SNX27Q96L92 541 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CLIC6Q96NY7 704 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CDC6Q99741 560 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 HERC2P3Q9BVR0 1158 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 UBE2OQ9C0C9 1292 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 IFT22Q9H7X7 185 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TCF7L1Q9HCS4 588 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 DNAJB9Q9UBS3 223 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MALT1Q9UDY8 824 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 GIT1Q9Y2X7 761 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TACC3Q9Y6A5 838 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 GNAT3A8MTJ3 354 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 M0R2N6 131 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 NDUFAB1O14561 156 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 AP5Z1O43299 807 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 MAFKO60675 156 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP5JP18859 108 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 KELP23276 732 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 HNF1BP35680 557 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 VPS41P49754 854 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 RNF144AP50876 292 aaPredicted RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC12A3P55017 1021 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 SEMA5AQ13591 1074 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 ADALQ6DHV7 355 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 PHLPP2Q6ZVD8 1323 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 TRIM46Q7Z4K8 759 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 GPR149Q86SP6 731 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 LUZP1Q86V48 1076 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 VSIG10LQ86VR7 867 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 CCAR2Q8N163 923 aaKnown RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 TCP11L2Q8N4U5 519 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 SMC1BQ8NDV3 1235 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 C1orf162Q8NEQ5 155 aaPredicted RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 FBXO30Q8TB52 745 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 ACMSDQ8TDX5 336 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 SH3RF3Q8TEJ3 882 aaPredicted RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 MAIP1Q8WWC4 291 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 NAF1Q96HR8 494 aaKnown RBP5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 FUCA2Q9BTY2 467 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 MMRN2Q9H8L6 949 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 PDE11AQ9HCR9 933 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 HESX1Q9UBX0 185 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 FETUBQ9UGM5 382 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 NDOR1Q9UHB4 597 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 LIMCH1Q9UPQ0 1083 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF148Q9UQR1 794 aa5.34□□□□□ -1.56
SPTBN1-206ENST00000602898 ARHGEF28Q8N1W1 1705 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PARP4Q9UKK3 1724 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 A0A1B0GVG6 124 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRC14BA6NHZ5 514 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PI4K2BG5E9Z4 385 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 LCE2BO14633 110 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MEFVO15553 781 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 FMO6PO60774 539 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 NPTXRO95502 500 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 HNRNPLP14866 589 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ALDH3A1P30838 453 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 S100A5P33763 92 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CCT6AP40227 531 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MYL6P60660 151 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CAMK2GQ13555 558 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms