RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 EPHA5P54756 1037 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 DUSP4Q13115 394 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 GPR17Q13304 367 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 ZNF852Q6ZMS4 543 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 SFR1Q86XK3 245 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 HSCBQ8IWL3 235 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 SMARCD2Q92925 531 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 SENP8Q96LD8 212 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 CRISPLD1Q9H336 500 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 TSC2P49815 1807 aa22.98■■□□□ 1.27
PPFIA3-209ENST00000602783 NCAM2O15394 837 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 NFICP08651 508 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 VIPR2P41587 438 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 MAGEA9P43362 315 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 TMEM132DQ14C87 1099 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 STK38Q15208 465 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 TEAD2Q15562 447 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 ADALQ6DHV7 355 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 DNASE1L2Q92874 299 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 SLC27A5Q9Y2P5 690 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 MRPS17Q9Y2R5 130 aaKnown RBP22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 WDR87Q6ZQQ6 2873 aa22.97■■□□□ 1.27
PPFIA3-209ENST00000602783 F5P12259 2224 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 A0A087X0B3 334 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 MYMKA6NI61 221 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 TISP43B9A030 160 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 SPTLC1O15269 473 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ODC1P11926 461 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 PSMC3P17980 439 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 GDI1P31150 447 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ALDH1A3P47895 512 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 EPHB3P54753 998 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 PLD1Q13393 1074 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 MYBPC2Q14324 1141 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 C9orf57Q5W0N0 161 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 SLFN12LQ6IEE8 588 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 CENPPQ6IPU0 288 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ARMCX5Q6P1M9 558 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 VITQ6UXI7 678 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 CCDC73Q6ZRK6 1079 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 SV2BQ7L1I2 683 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ATAD1Q8NBU5 361 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ZSCAN18Q8TBC5 510 aaPredicted RBP22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 CLDN23Q96B33 292 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ST6GALNAC4Q9H4F1 302 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 SLITRK6Q9H5Y7 841 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 ASB7Q9H672 318 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 FBXO4Q9UKT5 387 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 AGO2Q9UKV8 859 aaKnown RBP22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 DERAQ9Y315 318 aa22.96■■□□□ 1.27
PPFIA3-209ENST00000602783 SHISA7A6NL88 538 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 PIRO00625 290 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 PAX3P23760 479 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 STAT6P42226 847 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 CSTF1Q05048 431 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 ZNF720Q7Z2F6 126 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 SHKBP1Q8TBC3 707 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 IRF7Q92985 503 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 DNAJC19Q96DA6 116 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 TMEM209Q96SK2 561 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 LRRC3Q9BY71 257 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 GPR88Q9GZN0 384 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 DNAJC25Q9H1X3 360 aa22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 ZNF334Q9HCZ1 680 aaPredicted RBP22.95■■□□□ 1.26
PPFIA3-209ENST00000602783 A0A1W2PRU2 124 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 ANO9A1A5B4 782 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 MTMR11A4FU01 709 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 FZD5Q13467 585 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 ZNF528Q3MIS6 628 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 FOXD4L5Q5VV16 416 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 LINC00301Q8NCQ3 95 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 DEPDC1BQ8WUY9 529 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 FOXD4L4Q8WXT5 416 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 HVCN1Q96D96 273 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 PANK2Q9BZ23 570 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 IKZF4Q9H2S9 585 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 TRPV4Q9HBA0 871 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 SEL1LQ9UBV2 794 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 NDRG2Q9UN36 371 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 STYXL1Q9Y6J8 313 aa22.94■■□□□ 1.26
PPFIA3-209ENST00000602783 FANCMQ8IYD8 2048 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 MAN2B1O00754 1011 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 ZNF263O14978 683 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 PPP1R37O75864 691 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 HSP90AA1P07900 732 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 GAP43P17677 238 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 RPS9P46781 194 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 TMC8Q8IU68 726 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 MFSD6LQ8IWD5 586 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 TTC9BQ8N6N2 239 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 ZNF396Q96N95 335 aaPredicted RBP22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 HINFPQ9BQA5 517 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 MRPL44Q9H9J2 332 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 DPP3Q9NY33 737 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 C2CD2Q9Y426 696 aa22.93■■□□□ 1.26
PPFIA3-209ENST00000602783 TCHHQ07283 1943 aa22.92■■□□□ 1.26
PPFIA3-209ENST00000602783 HEPACAM2A8MVW5 462 aa22.92■■□□□ 1.26
PPFIA3-209ENST00000602783 SPTLC2O15270 562 aa22.92■■□□□ 1.26
PPFIA3-209ENST00000602783 KINO60870 393 aaKnown RBP22.92■■□□□ 1.26
PPFIA3-209ENST00000602783 SOAT2O75908 522 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms