RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ATAT1Q5SQI0 421 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 OVOS1Q6IE37 1185 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 LIMS2Q7Z4I7 341 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 CSGALNACT2Q8N6G5 542 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 SLC7A14Q8TBB6 771 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 PARD3BQ8TEW8 1205 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
RPS28-203ENST00000600659 CCDC47Q96A33 483 aaKnown RBP16.98■□□□□ 0.31
RPS28-203ENST00000600659 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 CRISPLD1Q9H336 500 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 WDR6Q9NNW5 1121 aaKnown RBP16.98■□□□□ 0.31
RPS28-203ENST00000600659 ARHGEF37A1IGU5 675 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 LRRIQ3A6PVS8 624 aaPredicted RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 ATF2P15336 505 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 BMP6P22004 513 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 SP100P23497 879 aaPredicted RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 SSTR3P32745 418 aaPredicted RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 PRCPP42785 496 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 UBE2HP62256 183 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 DUOXA2Q1HG44 320 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 C1orf220Q5T0J3 134 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 ZNF658Q5TYW1 1059 aaPredicted RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 CYP26C1Q6V0L0 522 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 RNF19BQ6ZMZ0 732 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 SMG7Q92540 1137 aaKnown RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 CCDC34Q96HJ3 373 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 ANKRD36BP1Q96IX9 119 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 GDAP2Q9NXN4 497 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 AFF4Q9UHB7 1163 aaKnown RBP16.97■□□□□ 0.31
RPS28-203ENST00000600659 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 L1RE1Q9UN81 338 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 CLUHO75153 1309 aa16.97■□□□□ 0.31
RPS28-203ENST00000600659 AKAP3O75969 853 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 CST3P01034 146 aaPredicted RBP16.96■□□□□ 0.31
RPS28-203ENST00000600659 HNRNPA1P09651 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
RPS28-203ENST00000600659 PNPLA4P41247 253 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 ARPP19P56211 112 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 MCCD1P59942 119 aaPredicted RBP16.96■□□□□ 0.31
RPS28-203ENST00000600659 DLG4P78352 724 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 RBP5P82980 135 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 UVSSAQ2YD98 709 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 TPGS2Q68CL5 300 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 ELMSAN1Q6PJG2 1045 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 RNF135Q8IUD6 432 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 TCEAL8Q8IYN2 117 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 EPHX3Q9H6B9 360 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 RMND1Q9NWS8 449 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 USTQ9Y2C2 406 aa16.96■□□□□ 0.31
RPS28-203ENST00000600659 OR6C75A6NL08 312 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 PI4K2BG5E9Z4 385 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 CCL16O15467 120 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 HCRTO43612 131 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 KINO60870 393 aaKnown RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 TNNC2P02585 160 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 KRT19P08727 400 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 NR2F2P24468 414 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 PMS1P54277 932 aaKnown RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 NTHL1P78549 312 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 GPR17Q13304 367 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 PPM1LQ5SGD2 360 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 LIN9Q5TKA1 542 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 CENPPQ6IPU0 288 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 CCDC149Q6ZUS6 474 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 RTL10Q7L3V2 364 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 USP37Q86T82 979 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 OSTM1Q86WC4 334 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 SMARCE1Q969G3 411 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 FNBP1Q96RU3 617 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 OXCT2Q9BYC2 517 aaPredicted RBP16.96■□□□□ 0.3
RPS28-203ENST00000600659 ZCWPW1Q9H0M4 648 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 XYLT2Q9H1B5 865 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 MUTYHQ9UIF7 546 aa16.96■□□□□ 0.3
RPS28-203ENST00000600659 MTMR11A4FU01 709 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 NRG2O14511 850 aaPredicted RBP16.95■□□□□ 0.3
RPS28-203ENST00000600659 GABRDO14764 452 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 MAPK13O15264 365 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
RPS28-203ENST00000600659 KIF20AO95235 890 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 SMC2O95347 1197 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 C4BPAP04003 597 aaKnown RBP16.95■□□□□ 0.3
RPS28-203ENST00000600659 CPB1P15086 417 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 TNNI1P19237 187 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 BFSP1Q12934 665 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 SOWAHAQ2M3V2 549 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 EDRF1Q3B7T1 1238 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 POTEHQ6S545 545 aa16.95■□□□□ 0.3
RPS28-203ENST00000600659 LRRTM3Q86VH5 581 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms