RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ASB3Q9Y575 518 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 KIF26AQ9ULI4 1882 aaPredicted RBP23■■□□□ 1.27
PNKP-212ENST00000599454 SPAG17Q6Q759 2223 aa23■■□□□ 1.27
PNKP-212ENST00000599454 ARNTLO00327 626 aa23■■□□□ 1.27
PNKP-212ENST00000599454 CHADO15335 359 aa23■■□□□ 1.27
PNKP-212ENST00000599454 VNN2O95498 520 aa23■■□□□ 1.27
PNKP-212ENST00000599454 FGF19O95750 216 aa23■■□□□ 1.27
PNKP-212ENST00000599454 ALDH1A3P47895 512 aa23■■□□□ 1.27
PNKP-212ENST00000599454 LIG4P49917 911 aa23■■□□□ 1.27
PNKP-212ENST00000599454 SPAG1Q07617 926 aa23■■□□□ 1.27
PNKP-212ENST00000599454 DUSP4Q13115 394 aa23■■□□□ 1.27
PNKP-212ENST00000599454 TMEM119Q4V9L6 283 aa23■■□□□ 1.27
PNKP-212ENST00000599454 MCTP1Q6DN14 999 aa23■■□□□ 1.27
PNKP-212ENST00000599454 HAUS6Q7Z4H7 955 aa23■■□□□ 1.27
PNKP-212ENST00000599454 TMC8Q8IU68 726 aa23■■□□□ 1.27
PNKP-212ENST00000599454 CELF5Q8N6W0 485 aaKnown RBP23■■□□□ 1.27
PNKP-212ENST00000599454 PGLYRP2Q96PD5 576 aa23■■□□□ 1.27
PNKP-212ENST00000599454 C8orf33Q9H7E9 229 aaPredicted RBP23■■□□□ 1.27
PNKP-212ENST00000599454 HSFX1Q9UBD0 423 aa23■■□□□ 1.27
PNKP-212ENST00000599454 TIMM13Q9Y5L4 95 aaPredicted RBP23■■□□□ 1.27
PNKP-212ENST00000599454 DNAH14Q0VDD8 3507 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 VWA3AA6NCI4 1184 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 LACTBL1A8MY62 500 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 OGTO15294 1046 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 PIGRP01833 764 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 ADRB2P07550 413 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 CHRNB1P11230 501 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 FCHO2Q0JRZ9 810 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 LRRC32Q14392 662 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 OVOS1Q6IE37 1185 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 CENPPQ6IPU0 288 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 CD302Q8IX05 232 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 AK8Q96MA6 479 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 PLIN2Q99541 437 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 DNAJC25Q9H1X3 360 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 RPF1Q9H9Y2 349 aaKnown RBP22.99■■□□□ 1.27
PNKP-212ENST00000599454 CDV3Q9UKY7 258 aaKnown RBP22.99■■□□□ 1.27
PNKP-212ENST00000599454 CACNA1BQ00975 2339 aa22.99■■□□□ 1.27
PNKP-212ENST00000599454 A0A1W2PRU2 124 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 HNRNPDLO14979 420 aaKnown RBP22.98■■□□□ 1.27
PNKP-212ENST00000599454 OR4Q2P0C623 313 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 CCNE1P24864 410 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 ABCD1P33897 745 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 TNFSF9P41273 254 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 CXCL12P48061 93 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 ENOX2Q16206 610 aaKnown RBP22.98■■□□□ 1.27
PNKP-212ENST00000599454 ARSHQ5FYA8 562 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 SPATA1Q5VX52 437 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 LAIR1Q6GTX8 287 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 SPEM1Q8N4L4 309 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 CRISPLD1Q9H336 500 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 TBX20Q9UMR3 447 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 USP18Q9UMW8 372 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 NCANO14594 1321 aa22.98■■□□□ 1.27
PNKP-212ENST00000599454 MTMR11A4FU01 709 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 FAM189A1O60320 539 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 ODC1P11926 461 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 TGM1P22735 817 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 CACNB1Q02641 598 aaPredicted RBP22.97■■□□□ 1.27
PNKP-212ENST00000599454 ARMCX5Q6P1M9 558 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 ITIH5Q86UX2 942 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 PSMG2Q969U7 264 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 OBP2AQ9NY56 170 aa22.97■■□□□ 1.27
PNKP-212ENST00000599454 NPHP3-ACAD11A0A0J9YXS1 232 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 LRP3O75074 770 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 PAPSS2O95340 614 aaPredicted RBP22.96■■□□□ 1.27
PNKP-212ENST00000599454 KPNA1P52294 538 aaPredicted RBP22.96■■□□□ 1.27
PNKP-212ENST00000599454 ATXN1P54253 815 aaKnown RBP22.96■■□□□ 1.27
PNKP-212ENST00000599454 LILRA4P59901 499 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 ARHGAP29Q52LW3 1261 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 ARHGAP15Q53QZ3 475 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 DNAJB7Q7Z6W7 309 aaPredicted RBP22.96■■□□□ 1.27
PNKP-212ENST00000599454 ARID3BQ8IVW6 561 aaPredicted RBP22.96■■□□□ 1.27
PNKP-212ENST00000599454 TMEM130Q8N3G9 435 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 RSPRY1Q96DX4 576 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 RTKNQ9BST9 563 aa22.96■■□□□ 1.27
PNKP-212ENST00000599454 A0A0B4J269 797 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 K7ENM7 598 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 FAM13AO94988 1023 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 WEE1P30291 646 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 CNR2P34972 360 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 GUCY2FP51841 1108 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 ZNF131P52739 623 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 DGKKQ5KSL6 1271 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 RALGPS2Q86X27 583 aaPredicted RBP22.95■■□□□ 1.26
PNKP-212ENST00000599454 CALML4Q96GE6 196 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 SENP8Q96LD8 212 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 MSTO1Q9BUK6 570 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 PARVGQ9HBI0 331 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 DERAQ9Y315 318 aa22.95■■□□□ 1.26
PNKP-212ENST00000599454 MYBPHLA2RUH7 354 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 H3BQV1 296 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 DPYSL4O14531 572 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 CYP11A1P05108 521 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 RETP07949 1114 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 TUFMP49411 452 aaKnown RBP22.94■■□□□ 1.26
PNKP-212ENST00000599454 SATB1Q01826 763 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 C9orf57Q5W0N0 161 aa22.94■■□□□ 1.26
PNKP-212ENST00000599454 GAREM2Q75VX8 874 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms