RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 MTMR11A4FU01 709 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 MYMKA6NI61 221 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 PIRO00625 290 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 LAMTOR5O43504 91 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 LRRN2O75325 713 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 IL18RAPO95256 599 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 LMNAP02545 664 aaKnown RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 IDEP14735 1019 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 GLULP15104 373 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 GJA1P17302 382 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 PSMC3P17980 439 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 CD72P21854 359 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 FCARP24071 287 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 TAF6P49848 677 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 EPHA5P54756 1037 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 TEAD2Q15562 447 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 SV2CQ496J9 727 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 ADSSL1Q8N142 457 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 THEM5Q8N1Q8 247 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ATAD1Q8NBU5 361 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 FAM200AQ8TCP9 573 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 DEPDC1BQ8WUY9 529 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 IRF7Q92985 503 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ZNF560Q96MR9 790 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 NELL2Q99435 816 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 PYM1Q9BRP8 204 aaKnown RBP10.6□□□□□ -0.71
VRK3-216ENST00000599342 HEBP1Q9NRV9 189 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 DPP3Q9NY33 737 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ASB3Q9Y575 518 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 R4GN57 208 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 USP34Q70CQ2 3546 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 MAN2B1O00754 1011 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 CYB561D2O14569 222 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 ZNF263O14978 683 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SPTLC1O15269 473 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 STX6O43752 255 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 PPP1R37O75864 691 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 VNN2O95498 520 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 FGF19O95750 216 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
VRK3-216ENST00000599342 CYP11A1P05108 521 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SP9P0CG40 484 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 TARSP26639 723 aaKnown RBP10.59□□□□□ -0.71
VRK3-216ENST00000599342 GDI1P31150 447 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 ALCAMQ13740 583 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 VEPH1Q14D04 833 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 STK38Q15208 465 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 MGAT5BQ3V5L5 792 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SLC39A12Q504Y0 691 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 CENPPQ6IPU0 288 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 POTEHQ6S545 545 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 VITQ6UXI7 678 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 ITIH5Q86UX2 942 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 NT5DC4Q86YG4 428 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 YAF2Q8IY57 180 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SYCP3Q8IZU3 236 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SHKBP1Q8TBC3 707 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 E2F7Q96AV8 911 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 ZSWIM3Q96MP5 696 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 GCNAQ96QF7 691 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 TMEM209Q96SK2 561 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SEPT5Q99719 369 aaPredicted RBP10.59□□□□□ -0.71
VRK3-216ENST00000599342 HINFPQ9BQA5 517 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 FAM213AQ9BRX8 229 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 CRISPLD1Q9H336 500 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 OLFML3Q9NRN5 406 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 HSFX1Q9UBD0 423 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 MTMR6Q9Y217 621 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 SLC27A5Q9Y2P5 690 aa10.59□□□□□ -0.71
VRK3-216ENST00000599342 MTF2Q9Y483 593 aaPredicted RBP10.59□□□□□ -0.71
VRK3-216ENST00000599342 MORC2Q9Y6X9 1032 aaPredicted RBP10.59□□□□□ -0.71
VRK3-216ENST00000599342 COL4A3Q01955 1670 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 HEPACAM2A8MVW5 462 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 DPYSL4O14531 572 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 MOSPD3O75425 235 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 SOAT2O75908 522 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 ADSSP30520 456 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 PNPLA4P41247 253 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 VIPR2P41587 438 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 TUFMP49411 452 aaKnown RBP10.58□□□□□ -0.72
VRK3-216ENST00000599342 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
VRK3-216ENST00000599342 KCNA1Q09470 495 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 SMARCB1Q12824 385 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 SLC39A14Q15043 492 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 TAF12Q16514 161 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 ARHGAP15Q53QZ3 475 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
VRK3-216ENST00000599342 STXBP4Q6ZWJ1 553 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 TMC8Q8IU68 726 aa10.58□□□□□ -0.72
VRK3-216ENST00000599342 BRSK2Q8IWQ3 736 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms