RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 DNAJC25Q9H1X3 360 aa19.58■□□□□ 0.72
LIG1-216ENST00000598938 KMT2EQ8IZD2 1858 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 SYN3O14994 580 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 CXCL14O95715 111 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 CST3P01034 146 aaPredicted RBP19.57■□□□□ 0.72
LIG1-216ENST00000598938 URODP06132 367 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 KRT19P08727 400 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 CCDC192P0DO97 292 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 BMS1Q14692 1282 aaKnown RBP19.57■□□□□ 0.72
LIG1-216ENST00000598938 ZSCAN23Q3MJ62 389 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 SV2CQ496J9 727 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 SV2AQ7L0J3 742 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 IRF2BP1Q8IU81 584 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 ENOX1Q8TC92 643 aaKnown RBP19.57■□□□□ 0.72
LIG1-216ENST00000598938 MICAL1Q8TDZ2 1067 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 AUTS2Q8WXX7 1259 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 MSLNLQ96KJ4 702 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 B3GALT6Q96L58 329 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 PCDHB8Q9UN66 801 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 SSX2IPQ9Y2D8 614 aa19.57■□□□□ 0.72
LIG1-216ENST00000598938 C2orf71A6NGG8 1288 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 HIDE1A8MVS5 230 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 STX10O60499 249 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 VNN1O95497 513 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 TKTP29401 623 aaKnown RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 GCLMP48507 274 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 PTPN5P54829 565 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 BIRC3Q13489 604 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 CLUL1Q15846 466 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 DCAF17Q5H9S7 520 aaPredicted RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 TRIM59Q8IWR1 403 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 PIK3R5Q8WYR1 880 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 SLC35C1Q96A29 364 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 SENP8Q96LD8 212 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 TMEM8AQ9HCN3 771 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 MRPL17Q9NRX2 175 aaKnown RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 R3HCC1Q9Y3T6 440 aaKnown RBP19.56■□□□□ 0.72
LIG1-216ENST00000598938 SCN1AP35498 2009 aa19.56■□□□□ 0.72
LIG1-216ENST00000598938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.55■□□□□ 0.72
LIG1-216ENST00000598938 KPNA7A9QM74 516 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 PHACTR2O75167 634 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 STAU1O95793 577 aaKnown RBP19.55■□□□□ 0.72
LIG1-216ENST00000598938 NDUFV1P49821 464 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 MYO1EQ12965 1108 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 ANO6Q4KMQ2 910 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 KIAA1841Q6NSI8 718 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 PDXDC1Q6P996 788 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 DSTYKQ6XUX3 929 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 ADGRD2Q7Z7M1 963 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 CEP57Q86XR8 500 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 EFHBQ8N7U6 833 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 SMRP1Q8NCR6 262 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 LNX1Q8TBB1 728 aaPredicted RBP19.55■□□□□ 0.72
LIG1-216ENST00000598938 RIN2Q8WYP3 895 aaPredicted RBP19.55■□□□□ 0.72
LIG1-216ENST00000598938 HPDLQ96IR7 371 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 XYLT2Q9H1B5 865 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 RXFP1Q9HBX9 757 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 GDAP2Q9NXN4 497 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 VWA8A3KMH1 1905 aa19.55■□□□□ 0.72
LIG1-216ENST00000598938 FSD2A1L4K1 749 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 C2CD2LO14523 706 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 CYP11A1P05108 521 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 ODC1P11926 461 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 TYMPP19971 482 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 ATICP31939 592 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 MYL6P60660 151 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 TRPC3Q13507 836 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 NCOA4Q13772 614 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
LIG1-216ENST00000598938 CBX2Q14781 532 aaPredicted RBP19.54■□□□□ 0.72
LIG1-216ENST00000598938 KRT39Q6A163 491 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 TRIM67Q6ZTA4 783 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 APPL2Q8NEU8 664 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 BPIFA3Q9BQP9 254 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 MMRN2Q9H8L6 949 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 VRTNQ9H8Y1 702 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.54■□□□□ 0.72
LIG1-216ENST00000598938 FNIP2Q9P278 1114 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 NFE2L3Q9Y4A8 694 aa19.54■□□□□ 0.72
LIG1-216ENST00000598938 ARHGEF37A1IGU5 675 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 LOC730098B7Z3J9 87 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CYB561D2O14569 222 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 LINC01565O15544 149 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 HLA-DRAP01903 254 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CA8P35219 290 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
LIG1-216ENST00000598938 MXI1P50539 228 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 MYL5Q02045 173 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CREMQ03060 361 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 PSMD5Q16401 504 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CBWD6Q4V339 395 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CBWD3Q5JTY5 395 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 CBWD5Q5RIA9 395 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 VARS2Q5ST30 1063 aaKnown RBP19.53■□□□□ 0.72
LIG1-216ENST00000598938 PRSS55Q6UWB4 352 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms