RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TAF6P49848 677 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 PTPN5P54829 565 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 ASIC1P78348 528 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 POSTNQ15063 836 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 RESP18Q5W5W9 173 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
LIG1-212ENST00000596549 OVOS1Q6IE37 1185 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 CNNM4Q6P4Q7 775 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 EPM2AIP1Q7L775 607 aaPredicted RBP14.12□□□□□ -0.15
LIG1-212ENST00000596549 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 CXorf38Q8TB03 319 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 BORCS6Q96GS4 357 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 KXD1Q9BQD3 176 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 CORO1BQ9BR76 489 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 DNAJC25Q9H1X3 360 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 MFSD1Q9H3U5 465 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 PCIF1Q9H4Z3 704 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 SLC2A4RGQ9NR83 387 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 DPP3Q9NY33 737 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
LIG1-212ENST00000596549 WNT16Q9UBV4 365 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 FBXL21Q9UKT6 434 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 ZDHHC9Q9Y397 364 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 MRPS23Q9Y3D9 190 aaKnown RBP14.12□□□□□ -0.15
LIG1-212ENST00000596549 PCDHB13Q9Y5F0 798 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 NCANO14594 1321 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 POLR2DO15514 142 aaKnown RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 PTPN2P17706 415 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 EPHA5P54756 1037 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 GPR17Q13304 367 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 ARMCX5Q6P1M9 558 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 MTSS1LQ765P7 747 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 USP37Q86T82 979 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 NT5DC4Q86YG4 428 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 TMC8Q8IU68 726 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 FANCMQ8IYD8 2048 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 SYCP3Q8IZU3 236 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 IQUBQ8NA54 791 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 MCRS1Q96EZ8 462 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 PRRX2Q99811 253 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 PYM1Q9BRP8 204 aaKnown RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 BLZF1Q9H2G9 400 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 TMEM206Q9H813 350 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 ARHGEF3Q9NR81 526 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 FAM86C1Q9NVL1 165 aa14.11□□□□□ -0.15
LIG1-212ENST00000596549 HELZP42694 1942 aaKnown RBP14.11□□□□□ -0.15
LIG1-212ENST00000596549 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
LIG1-212ENST00000596549 EXTL3O43909 919 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 SOAT2O75908 522 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 LDHAP00338 332 aaKnown RBP14.1□□□□□ -0.15
LIG1-212ENST00000596549 ITGB3P05106 788 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 GJA1P17302 382 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 POLR2BP30876 1174 aaKnown RBP14.1□□□□□ -0.15
LIG1-212ENST00000596549 ME1P48163 572 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 CLCN5P51795 746 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 GPC5P78333 572 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 MYBPC2Q14324 1141 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 FAM26FQ5R3K3 315 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 ATL3Q6DD88 541 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 CENPPQ6IPU0 288 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 UNC13DQ70J99 1090 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 ALYREFQ86V81 257 aaKnown RBP14.1□□□□□ -0.15
LIG1-212ENST00000596549 GPD1LQ8N335 351 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 C7orf25Q9BPX7 421 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 LRRC3Q9BY71 257 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 PLA2G2FQ9BZM2 168 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 MTMR12Q9C0I1 747 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 ZCWPW1Q9H0M4 648 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 TBC1D17Q9HA65 648 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 MAGEF1Q9HAY2 307 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 MAFFQ9ULX9 164 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
LIG1-212ENST00000596549 ANAPC1Q9H1A4 1944 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 H0Y858 1186 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 CYB561D2O14569 222 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 TGFB1I1O43294 461 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 PAX3P23760 479 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 MRE11P49959 708 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 CDR1P51861 262 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 NUBP1P53384 320 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 TFAMQ00059 246 aaKnown RBP14.09□□□□□ -0.15
LIG1-212ENST00000596549 DUSP4Q13115 394 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 CUL4BQ13620 913 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 SV2CQ496J9 727 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 WSCD1Q658N2 575 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 LMBRD2Q68DH5 695 aaPredicted RBP14.09□□□□□ -0.15
LIG1-212ENST00000596549 PDZD4Q76G19 769 aaPredicted RBP14.09□□□□□ -0.15
LIG1-212ENST00000596549 CBWD2Q8IUF1 395 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 GRAMD1CQ8IYS0 662 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 NOC3LQ8WTT2 800 aaKnown RBP14.09□□□□□ -0.15
LIG1-212ENST00000596549 ZNF560Q96MR9 790 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 GDE1Q9NZC3 331 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms