RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PLD1Q13393 1074 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 LRRC32Q14392 662 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CSRP2Q16527 193 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 KRT79Q5XKE5 535 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CENPPQ6IPU0 288 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 PRR23CQ6ZRP0 262 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 GAREM2Q75VX8 874 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 LONP2Q86WA8 852 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 ARID3BQ8IVW6 561 aaPredicted RBP10.86□□□□□ -0.67
LIG1-209ENST00000596104 TTC9BQ8N6N2 239 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CSGALNACT1Q8TDX6 532 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 PGLYRP2Q96PD5 576 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 MTMR11A4FU01 709 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 SPECC1L-ADORA2AF8WAN1 911 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 CLDN3O15551 220 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 FAM189A1O60320 539 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 GDF9O60383 454 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 CYP3A5P20815 502 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 PRPHP41219 470 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 GUCY2FP51841 1108 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 KPNA1P52294 538 aaPredicted RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 EPHB3P54753 998 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 STRN3Q13033 797 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 CCINQ13939 588 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 MYBPC2Q14324 1141 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 PPM1JQ5JR12 505 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 DGKKQ5KSL6 1271 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 HYIQ5T013 277 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 DNAJB7Q7Z6W7 309 aaPredicted RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 RALGPS2Q86X27 583 aaPredicted RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 GPIHBP1Q8IV16 184 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 YAF2Q8IY57 180 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 ATAD1Q8NBU5 361 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 KCNN1Q92952 543 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 PSMG2Q969U7 264 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 KIF12Q96FN5 646 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 ZFYVE19Q96K21 471 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 PNMA5Q96PV4 448 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 TMEM209Q96SK2 561 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 OBP2AQ9NY56 170 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 GTSE1Q9NYZ3 720 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 UBQLN1Q9UMX0 589 aaKnown RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 ASB3Q9Y575 518 aa10.85□□□□□ -0.67
LIG1-209ENST00000596104 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
LIG1-209ENST00000596104 LAD1O00515 517 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 PPEF2O14830 753 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 SOAT2O75908 522 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 PRAMEF12O95522 483 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 ADRB2P07550 413 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 TYMPP19971 482 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 TNFSF9P41273 254 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 SMTNP53814 917 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 SLC12A3P55017 1021 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 RAD51AP2Q09MP3 1159 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 HEATR6Q6AI08 1181 aaKnown RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 OVOS1Q6IE37 1185 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 USP37Q86T82 979 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 FAM160A2Q8N612 972 aaPredicted RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 SYT2Q8N9I0 419 aaPredicted RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
LIG1-209ENST00000596104 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 SLC27A5Q9Y2P5 690 aa10.84□□□□□ -0.67
LIG1-209ENST00000596104 LACTBL1A8MY62 500 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 SEC24BO95487 1268 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 PIGRP01833 764 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 GABRR2P28476 465 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 WEE1P30291 646 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 NCKAP1LP55160 1127 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 LILRA4P59901 499 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 PPP2R3AQ06190 1150 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 TNK2Q07912 1038 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 PON2Q15165 354 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 ARSHQ5FYA8 562 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 GPR158Q5T848 1215 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 SPATA1Q5VX52 437 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 SYNPOQ8N3V7 929 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 KCTD17Q8N5Z5 321 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 FAM184AQ8NB25 1140 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 OR10T2Q8NGX3 314 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 ATXN3LQ9H3M9 355 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 KCND2Q9NZV8 630 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 HSFX1Q9UBD0 423 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 CHD8Q9HCK8 2581 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 TRIP11Q15643 1979 aa10.83□□□□□ -0.68
LIG1-209ENST00000596104 NPHP3-ACAD11A0A0J9YXS1 232 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 DPYSL4O14531 572 aa10.82□□□□□ -0.68
LIG1-209ENST00000596104 OGTO15294 1046 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms