RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FAM126AQ9BYI3 521 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-203ENST00000593641 ZHX3Q9H4I2 956 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 TRPV4Q9HBA0 871 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 SHISA7A6NL88 538 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 FAM189A1O60320 539 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 ODC1P11926 461 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 ABCD1P33897 745 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 FZD5Q13467 585 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 PUM1Q14671 1186 aaKnown RBP eCLIP24.59■■□□□ 1.53
SSBP4-203ENST00000593641 PPP2R5DQ14738 602 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 MFSD6LQ8IWD5 586 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 CD302Q8IX05 232 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 YAF2Q8IY57 180 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 CHRDQ9H2X0 955 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 SMC3Q9UQE7 1217 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 NUP210Q8TEM1 1887 aaPredicted RBP24.59■■□□□ 1.53
SSBP4-203ENST00000593641 SCN1AP35498 2009 aa24.59■■□□□ 1.53
SSBP4-203ENST00000593641 TSC2P49815 1807 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 A0A1W2PRU2 124 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 HEPACAM2A8MVW5 462 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 TRAK2O60296 914 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 TBCAO75347 108 aaKnown RBP24.58■■□□□ 1.53
SSBP4-203ENST00000593641 BMP15O95972 392 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 ZNF131P52739 623 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 MYBPC2Q14324 1141 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 SPATA1Q5VX52 437 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 ARMCX5Q6P1M9 558 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 CSGALNACT1Q8TDX6 532 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 NELL1Q92832 810 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 EPC1Q9H2F5 836 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 CRISPLD1Q9H336 500 aa24.58■■□□□ 1.53
SSBP4-203ENST00000593641 SMG5Q9UPR3 1016 aaKnown RBP24.58■■□□□ 1.53
SSBP4-203ENST00000593641 LILRB5O75023 590 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 VNN2O95498 520 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 PAX3P23760 479 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 LILRA4P59901 499 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 JADE1Q6IE81 842 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 CENPPQ6IPU0 288 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 TMC8Q8IU68 726 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 GPR161Q8N6U8 529 aaKnown RBP24.57■■□□□ 1.52
SSBP4-203ENST00000593641 DNAJC25Q9H1X3 360 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 ASB3Q9Y575 518 aa24.57■■□□□ 1.52
SSBP4-203ENST00000593641 A0A0B4J269 797 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 MTMR11A4FU01 709 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 ADRB2P07550 413 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 PLCG1P19174 1290 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 LONP1P36776 959 aaKnown RBP24.56■■□□□ 1.52
SSBP4-203ENST00000593641 MCM2P49736 904 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 NRLP54845 237 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 MCM6Q14566 821 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 TMEM132DQ14C87 1099 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 C1orf228Q6PIY5 440 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 ZNF687Q8N1G0 1237 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 RAD54LQ92698 747 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 MSANTD3Q96H12 275 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 SENP8Q96LD8 212 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 LRRC3Q9BY71 257 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 LMAN1LQ9HAT1 526 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 UPF2Q9HAU5 1272 aaKnown RBP24.56■■□□□ 1.52
SSBP4-203ENST00000593641 BLOC1S4Q9NUP1 217 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 CPSF3Q9UKF6 684 aaKnown RBP24.56■■□□□ 1.52
SSBP4-203ENST00000593641 SLC27A5Q9Y2P5 690 aa24.56■■□□□ 1.52
SSBP4-203ENST00000593641 PPEF2O14830 753 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 CCR3P51677 355 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 KARSQ15046 597 aaKnown RBP24.55■■□□□ 1.52
SSBP4-203ENST00000593641 C9orf57Q5W0N0 161 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 LARP1BQ659C4 914 aaKnown RBP24.55■■□□□ 1.52
SSBP4-203ENST00000593641 ITIH5Q86UX2 942 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 ATAD1Q8NBU5 361 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 DERAQ9Y315 318 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.55■■□□□ 1.52
SSBP4-203ENST00000593641 NCANO14594 1321 aa24.55■■□□□ 1.52
SSBP4-203ENST00000593641 CHADO15335 359 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 FGF19O95750 216 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 NFICP08651 508 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 CCNE1P24864 410 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 SLC39A4Q6P5W5 647 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 MAMSTRQ6ZN01 415 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 BRAPQ7Z569 592 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 LRRC15Q8TF66 581 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 PSMG2Q969U7 264 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 DLL3Q9NYJ7 618 aa24.54■■□□□ 1.52
SSBP4-203ENST00000593641 SPTBN2O15020 2390 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ARNTLO00327 626 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 DPYSL4O14531 572 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 NMT1P30419 496 aaKnown RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 KPNA1P52294 538 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 MLLT6P55198 1093 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 GTF2BQ00403 316 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ARHGAP15Q53QZ3 475 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ADALQ6DHV7 355 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 DNAJB7Q7Z6W7 309 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ARID3BQ8IVW6 561 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 FAM200AQ8TCP9 573 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 LARP4BQ92615 738 aaKnown RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 TMEM209Q96SK2 561 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 SEPT5Q99719 369 aaPredicted RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ATXN3LQ9H3M9 355 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ASB7Q9H672 318 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms