RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 BLMHQ13867 455 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DLGAP5Q15398 846 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 STILQ15468 1287 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 MAPRE2Q15555 327 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.72□□□□□ -1.81
VMP1-216ENST00000592790 NSMFQ6X4W1 530 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CCNJLQ8IV13 435 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 BEGAINQ9BUH8 593 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TRIM15Q9C019 465 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 STN1Q9H668 368 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 PKD2L1Q9P0L9 805 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PAK5Q9P286 719 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GAKO14976 1311 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 NWD2Q9ULI1 1742 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.71□□□□□ -1.81
VMP1-216ENST00000592790 DENND3A2RUS2 1198 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 SFI1A8K8P3 1242 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 H0YGN5 161 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 DNM1LO00429 736 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 WNT7AO00755 349 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 NPTXRO95502 500 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 IFI35P80217 286 aaPredicted RBP3.71□□□□□ -1.81
VMP1-216ENST00000592790 PPATQ06203 517 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 TCP10Q12799 353 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 NFX1Q12986 1120 aaKnown RBP3.71□□□□□ -1.81
VMP1-216ENST00000592790 ZBTB17Q13105 803 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ZNF746Q6NUN9 644 aaPredicted RBP3.71□□□□□ -1.81
VMP1-216ENST00000592790 KIF2BQ8N4N8 673 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 PRELID2Q8N945 189 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 TBC1D16Q8TBP0 767 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 DEPDC1BQ8WUY9 529 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 PIK3R5Q8WYR1 880 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 FAF2Q96CS3 445 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 FAM167AQ96KS9 214 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 C11orf70Q9BRQ4 267 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 RUSC1Q9BVN2 902 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 HEMGNQ9BXL5 484 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 GOLPH3Q9H4A6 298 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 DNAJC18Q9H819 358 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 RSAD1Q9HA92 442 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 NPHS2Q9NP85 383 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ARHGEF3Q9NR81 526 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 PLSCR2Q9NRY7 297 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ABCF3Q9NUQ8 709 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ETAA1Q9NY74 926 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.71□□□□□ -1.817e-24■□□□□ 10.4
VMP1-216ENST00000592790 NINJ2Q9NZG7 142 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 DLGAP2Q9P1A6 1054 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 HESX1Q9UBX0 185 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 NFS1Q9Y697 457 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 PLCH1Q4KWH8 1693 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ASTN1O14525 1302 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ZC3H4Q9UPT8 1303 aaKnown RBP3.71□□□□□ -1.81
VMP1-216ENST00000592790 IGSF9BQ9UPX0 1349 aa3.71□□□□□ -1.81
VMP1-216ENST00000592790 ARAP2Q8WZ64 1704 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MYO5AQ9Y4I1 1855 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 ANKRD36CQ5JPF3 1778 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 H0YIN7 160 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 EXTL3O43909 919 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ASNSP08243 561 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RARAP10276 462 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 YWHABP31946 246 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 EFNA5P52803 228 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GPSM2P81274 684 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ADCY1Q08828 1119 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 DNAJC3Q13217 504 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CYLC2Q14093 348 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 RCN1Q15293 331 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 C9orf131Q5VYM1 1079 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CASC4Q6P4E1 433 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 C16orf89Q6UX73 402 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CAPN12Q6ZSI9 719 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ACAD11Q709F0 780 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 EXOC3L1Q86VI1 746 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RASSF3Q86WH2 238 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 LNX1Q8TBB1 728 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 HAS1Q92839 578 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC5A5Q92911 643 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 C9orf72Q96LT7 481 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MXRA8Q9BRK3 442 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MRIQ9BWK5 157 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 C2orf40Q9H1Z8 148 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 VPS33BQ9H267 617 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 KIF9Q9HAQ2 790 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MLXIPLQ9NP71 852 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC9A2Q9UBY0 812 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 HAO1Q9UJM8 370 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 DCTN4Q9UJW0 460 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MARF1Q9Y4F3 1742 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 RREB1Q92766 1687 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 DYTNA2CJ06 578 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 F8W8V4 182 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 K7ERI5 159 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CAPN9O14815 690 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC16A4O15374 487 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SRGAP2BP0DMP2 458 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RALAP11233 206 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MYL4P12829 197 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ALAS1P13196 640 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PECAM1P16284 738 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms