RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 KIAA1586Q9HCI6 787 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 HCFC1R1Q9NWW0 138 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 POLIQ9UNA4 740 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 MAPK8IP1Q9UQF2 711 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 ANO9A1A5B4 782 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 WDR27A2RRH5 827 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 ANHXE9PGG2 379 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 M0QZQ0 153 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 SPTLC1O15269 473 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 EXOC3O60645 756 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 XYLBO75191 536 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 RHOBTB3O94955 611 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 SEC24AO95486 1093 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 ITGB3P05106 788 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 KRT19P08727 400 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 ODC1P11926 461 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 POLR2BP30876 1174 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 AARSP49588 968 aaKnown RBP eCLIP15.03■□□□□ -0
CLIP3-205ENST00000592017 TAF6P49848 677 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 LILRA4P59901 499 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 SNRPFP62306 86 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 NHLH1Q02575 133 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 YWHAHQ04917 246 aaPredicted RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 SNW1Q13573 536 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 RTL10Q7L3V2 364 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 USP37Q86T82 979 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 NT5DC4Q86YG4 428 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 ENGASEQ8NFI3 743 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 GOLGA5Q8TBA6 731 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 CACTINQ8WUQ7 758 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 ERCC4Q92889 916 aaPredicted RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 ANKRD36BP1Q96IX9 119 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 SENP8Q96LD8 212 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 ZNF560Q96MR9 790 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 CGNQ9P2M7 1197 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 DNMT3BQ9UBC3 853 aaKnown RBP15.03■□□□□ -0
CLIP3-205ENST00000592017 DUSP12Q9UNI6 340 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 MYO10Q9HD67 2058 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 TCHHQ07283 1943 aa15.03■□□□□ -0
CLIP3-205ENST00000592017 TRIP11Q15643 1979 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 PDCD11Q14690 1871 aaKnown RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 PTPRJQ12913 1337 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 CACNA1HO95180 2353 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 ARHGEF37A1IGU5 675 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 PIRO00625 290 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 GADD45BO75293 160 aaPredicted RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 OAZ2O95190 189 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 KIF20AO95235 890 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 DLATP10515 647 aaKnown RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 CPB1P15086 417 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 HOXD11P31277 338 aaPredicted RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 HTR4Q13639 388 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 KCNB1Q14721 858 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 C12orf56Q8IXR9 622 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 SMYD4Q8IYR2 804 aaPredicted RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 C1orf127Q8N9H9 656 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 FGF13Q92913 245 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 CCDC127Q96BQ5 260 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 FNBP1Q96RU3 617 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 RPP25Q9BUL9 199 aaKnown RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 CDH7Q9ULB5 785 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 AGAP1Q9UPQ3 857 aa15.02■□□□□ -0
CLIP3-205ENST00000592017 R3HCC1Q9Y3T6 440 aaKnown RBP15.02■□□□□ -0
CLIP3-205ENST00000592017 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
CLIP3-205ENST00000592017 TNNC2P02585 160 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 ATF2P15336 505 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 NPR3P17342 541 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 TNNI1P19237 187 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 CYP24A1Q07973 514 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 TCF15Q12870 199 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 BFSP1Q12934 665 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 SURF1Q15526 300 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 SV2CQ496J9 727 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 OVOS1Q6IE37 1185 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 POTEHQ6S545 545 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 PARM1Q6UWI2 310 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 TCEAL8Q8IYN2 117 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 TMEM105Q8N8V8 129 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 OR5B17Q8NGF7 314 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 SMARCE1Q969G3 411 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 NXPE3Q969Y0 559 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 KCTD10Q9H3F6 313 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 RMND1Q9NWS8 449 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 HOOK1Q9UJC3 728 aaKnown RBP15.01□□□□□ -0.01
CLIP3-205ENST00000592017 ITGA11Q9UKX5 1188 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 NUMBLQ9Y6R0 609 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 VWA8A3KMH1 1905 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 DENND4AQ7Z401 1863 aa15.01□□□□□ -0.01
CLIP3-205ENST00000592017 C2orf16Q68DN1 1984 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 CYB561D2O14569 222 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 PRRG1O14668 218 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 CALUO43852 315 aaPredicted RBP15□□□□□ -0.01
CLIP3-205ENST00000592017 SMC2O95347 1197 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 VNN2O95498 520 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 NR3C1P04150 777 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 OR4Q2P0C623 313 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 TYMPP19971 482 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 PAX3P23760 479 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms