RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 KPNA7A9QM74 516 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 ITGB3P05106 788 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 POLR2BP30876 1174 aaKnown RBP29.39■■■□□ 2.3
SMAD4-213ENST00000591914 ADCY1Q08828 1119 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 MYBPC2Q14324 1141 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 SURF1Q15526 300 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 SNRNP35Q16560 246 aaKnown RBP29.39■■■□□ 2.3
SMAD4-213ENST00000591914 KRBA2Q6ZNG9 492 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 GET4Q7L5D6 327 aaPredicted RBP29.39■■■□□ 2.3
SMAD4-213ENST00000591914 UBALD2Q8IYN6 164 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 FAM84AQ96KN4 292 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 HCFC1R1Q9NWW0 138 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 DNMT3BQ9UBC3 853 aaKnown RBP29.39■■■□□ 2.3
SMAD4-213ENST00000591914 INSL5Q9Y5Q6 135 aa29.39■■■□□ 2.3
SMAD4-213ENST00000591914 TMEM221A6NGB7 291 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 M0R296 226 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 TULP1O00294 542 aaPredicted RBP29.38■■■□□ 2.29
SMAD4-213ENST00000591914 CYB561D2O14569 222 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 CLIC2O15247 247 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 ZNF202O95125 648 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 RPN1P04843 607 aaKnown RBP29.38■■■□□ 2.29
SMAD4-213ENST00000591914 PRR29P0C7W0 189 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 CYP2J2P51589 502 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 HFE2Q6ZVN8 426 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 LRRC52Q8N7C0 313 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 XXYLT1Q8NBI6 393 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 ASIC4Q96FT7 647 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 MTMR12Q9C0I1 747 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 KCNK12Q9HB15 430 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 INTS13Q9NVM9 706 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 AGAP1Q9UPQ3 857 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 NOTCH4Q99466 2003 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 PTPRJQ12913 1337 aa29.38■■■□□ 2.29
SMAD4-213ENST00000591914 VNN2O95498 520 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 LRG1P02750 347 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 OR4Q2P0C623 313 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 TMEM191BP0C7N4 346 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 LAMP2P13473 410 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 DPYDQ12882 1025 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 GPR17Q13304 367 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 BMP8AQ7Z5Y6 402 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 IGSF9Q9P2J2 1179 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 SIX4Q9UIU6 781 aa29.37■■■□□ 2.29
SMAD4-213ENST00000591914 ZFP37Q9Y6Q3 630 aaPredicted RBP29.37■■■□□ 2.29
SMAD4-213ENST00000591914 PABPC1LQ4VXU2 614 aaKnown RBP29.36■■■□□ 2.29
SMAD4-213ENST00000591914 SCARA3Q6AZY7 606 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 CSGALNACT2Q8N6G5 542 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 OR5B17Q8NGF7 314 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 OR10T2Q8NGX3 314 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 GOLGA5Q8TBA6 731 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 ANKRD36BP1Q96IX9 119 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 SMOC2Q9H3U7 446 aa29.36■■■□□ 2.29
SMAD4-213ENST00000591914 RBP5P82980 135 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 WSCD1Q658N2 575 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 LMBRD2Q68DH5 695 aaPredicted RBP29.35■■■□□ 2.29
SMAD4-213ENST00000591914 METTL23Q86XA0 190 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 WDR49Q8IV35 697 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 RDH13Q8NBN7 331 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 ITFG1Q8TB96 612 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 TMEM209Q96SK2 561 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 RTP3Q9BQQ7 232 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 AVENQ9NQS1 362 aaPredicted RBP29.35■■■□□ 2.29
SMAD4-213ENST00000591914 CDH7Q9ULB5 785 aa29.35■■■□□ 2.29
SMAD4-213ENST00000591914 RHOBTB3O94955 611 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 RHOP08100 348 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 CYP24A1Q07973 514 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 TDGQ13569 410 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 PSMD6Q15008 389 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 DUOXA2Q1HG44 320 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 TMEM174Q8WUU8 243 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 NXPE3Q969Y0 559 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 PGLYRP2Q96PD5 576 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 KCTD10Q9H3F6 313 aa29.34■■■□□ 2.29
SMAD4-213ENST00000591914 ANHXE9PGG2 379 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 TNNC2P02585 160 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 PTPN2P17706 415 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 FMR1NBQ8N0W7 255 aaPredicted RBP29.33■■■□□ 2.29
SMAD4-213ENST00000591914 FGF13Q92913 245 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 ZCWPW1Q9H0M4 648 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 CRISPLD1Q9H336 500 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 GDAP2Q9NXN4 497 aa29.33■■■□□ 2.29
SMAD4-213ENST00000591914 MTMR11A4FU01 709 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 KRT19P08727 400 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 TWF1Q12792 350 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 BFSP1Q12934 665 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 CENPPQ6IPU0 288 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 THEM5Q8N1Q8 247 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 RSAD2Q8WXG1 361 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 CCDC47Q96A33 483 aaKnown RBP29.32■■■□□ 2.28
SMAD4-213ENST00000591914 MFSD14AQ96MC6 490 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 GZF1Q9H116 711 aaPredicted RBP29.32■■■□□ 2.28
SMAD4-213ENST00000591914 DMAC2Q9NW81 257 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 RAPGEFL1Q9UHV5 662 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 YIPF1Q9Y548 306 aa29.32■■■□□ 2.28
SMAD4-213ENST00000591914 GOLGA6L4A6NEF3 574 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 PDXKO00764 312 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 DUSP4Q13115 394 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 HTR4Q13639 388 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 SLC5A9Q2M3M2 681 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 SLC9A9Q8IVB4 645 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms