RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ANKRD40Q6AI12 368 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 OVOS1Q6IE37 1185 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 SLC8B1Q6J4K2 584 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 ZNF280DQ6N043 979 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 GPR149Q86SP6 731 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 SLC7A14Q8TBB6 771 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 PARD3BQ8TEW8 1205 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 ANKRD36BP1Q96IX9 119 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 PGLYRP2Q96PD5 576 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 FNBP1Q96RU3 617 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 CRISPLD1Q9H336 500 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 RMND1Q9NWS8 449 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 L1RE1Q9UN81 338 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 H7C4K7 107 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 ABLIM3O94929 683 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TNNC2P02585 160 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 CYP11A1P05108 521 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 C8AP07357 584 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 ODC1P11926 461 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TYMPP19971 482 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
VMP1-211ENST00000591315 MORC3Q14149 939 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 SURF1Q15526 300 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TDRD10Q5VZ19 366 aaKnown RBP12.41□□□□□ -0.42
VMP1-211ENST00000591315 CENPPQ6IPU0 288 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 CES5AQ6NT32 575 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 PDXDC1Q6P996 788 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 USP37Q86T82 979 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
VMP1-211ENST00000591315 GJD3Q8N144 294 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 TTC9BQ8N6N2 239 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 SMG7Q92540 1137 aaKnown RBP12.41□□□□□ -0.42
VMP1-211ENST00000591315 HPDLQ96IR7 371 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.42
VMP1-211ENST00000591315 ITGA11Q9UKX5 1188 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 POLIQ9UNA4 740 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.41□□□□□ -0.42
VMP1-211ENST00000591315 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
VMP1-211ENST00000591315 DENND4AQ7Z401 1863 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 LRRN2O75325 713 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 SOAT2O75908 522 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 VNN1O95497 513 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 CPB1P15086 417 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ACAT1P24752 427 aaKnown RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 MYL6P60660 151 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ITIH3Q06033 890 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ADCY1Q08828 1119 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ADAM9Q13443 819 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 NFIL3Q16649 462 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 SV2CQ496J9 727 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ATAT1Q5SQI0 421 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 LRRC52Q8N7C0 313 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ATAD1Q8NBU5 361 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ST13P5Q8NFI4 369 aaPredicted RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 GPT2Q8TD30 523 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 TMEM174Q8WUU8 243 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 PRKD2Q9BZL6 878 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 TMLHEQ9NVH6 421 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
VMP1-211ENST00000591315 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 SLC27A5Q9Y2P5 690 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 NME7Q9Y5B8 376 aa12.4□□□□□ -0.42
VMP1-211ENST00000591315 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 LOC730098B7Z3J9 87 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 N4BP1O75113 896 aaKnown RBP12.39□□□□□ -0.43
VMP1-211ENST00000591315 KIF20AO95235 890 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 MTHFRP42898 656 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 STX17P56962 302 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 CLDN10P78369 228 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 MYBPC2Q14324 1141 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 PPM1LQ5SGD2 360 aa12.39□□□□□ -0.43
VMP1-211ENST00000591315 LIN9Q5TKA1 542 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms