RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DUSP9Q99956 384 aaKnown RBP22.92■■□□□ 1.26
ATG4D-212ENST00000590096 OXCT2Q9BYC2 517 aaPredicted RBP22.92■■□□□ 1.26
ATG4D-212ENST00000590096 DZANK1Q9NVP4 752 aa22.92■■□□□ 1.26
ATG4D-212ENST00000590096 STX10O60499 249 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 HUS1O60921 280 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 OAZ2O95190 189 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 FGFR1OPO95684 399 aaKnown RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 C1RP00736 705 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 C4BPAP04003 597 aaKnown RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 CYP11A1P05108 521 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 DPCR1Q3MIW9 517 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 CCDC40Q4G0X9 1142 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 TDRD10Q5VZ19 366 aaKnown RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 SCARA3Q6AZY7 606 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 ANKRD54Q6NXT1 300 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 ATXN2LQ8WWM7 1075 aaKnown RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 BORCS6Q96GS4 357 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 MMRN2Q9H8L6 949 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 METTL14Q9HCE5 456 aaKnown RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 GDAP2Q9NXN4 497 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 CLEC1BQ9P126 229 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 ARMCX3Q9UH62 379 aaPredicted RBP22.91■■□□□ 1.26
ATG4D-212ENST00000590096 CD207Q9UJ71 328 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 SNX9Q9Y5X1 595 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 PLXNA3P51805 1871 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 NCOR1O75376 2440 aa22.91■■□□□ 1.26
ATG4D-212ENST00000590096 TGM5O43548 720 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 CST3P01034 146 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-212ENST00000590096 HOXB8P17481 243 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-212ENST00000590096 ATICP31939 592 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 MRPS5P82675 430 aaKnown RBP22.9■■□□□ 1.26
ATG4D-212ENST00000590096 RAB33AQ14088 237 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 CLUL1Q15846 466 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 LEXMQ3ZCV2 418 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 C1orf220Q5T0J3 134 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 TCERG1LQ5VWI1 586 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 SASS6Q6UVJ0 657 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 MAN1C1Q9NR34 630 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 FBXL5Q9UKA1 691 aa22.9■■□□□ 1.26
ATG4D-212ENST00000590096 TSC2P49815 1807 aa22.89■■□□□ 1.26
ATG4D-212ENST00000590096 ADAM12O43184 909 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 TBC1D4O60343 1298 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 GNA14O95837 355 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 GTF2H1P32780 548 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 GCLMP48507 274 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 ARPP19P56211 112 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 NCOA4Q13772 614 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 ZACNQ401N2 412 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 DCAF17Q5H9S7 520 aaPredicted RBP22.89■■□□□ 1.25
ATG4D-212ENST00000590096 WSCD1Q658N2 575 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 SLC8B1Q6J4K2 584 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 RSPO2Q6UXX9 243 aaPredicted RBP22.89■■□□□ 1.25
ATG4D-212ENST00000590096 SV2AQ7L0J3 742 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 FRMD5Q7Z6J6 570 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 THEM5Q8N1Q8 247 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 TOP6BLQ8N6T0 577 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 MSLNLQ96KJ4 702 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 SRRTQ9BXP5 876 aaKnown RBP22.89■■□□□ 1.25
ATG4D-212ENST00000590096 PLEKHA4Q9H4M7 779 aa22.89■■□□□ 1.25
ATG4D-212ENST00000590096 OR6C75A6NL08 312 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 SPATA31D3P0C874 917 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 CPB1P15086 417 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 PIK3CAP42336 1068 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 MYL6P60660 151 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 TNNC1P63316 161 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 ROR1Q01973 937 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 PPP3CAQ08209 521 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 TPD52L1Q16890 204 aaPredicted RBP22.88■■□□□ 1.25
ATG4D-212ENST00000590096 ZNF699Q32M78 642 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 PUS10Q3MIT2 529 aaKnown RBP22.88■■□□□ 1.25
ATG4D-212ENST00000590096 CAVIN1Q6NZI2 390 aaKnown RBP22.88■■□□□ 1.25
ATG4D-212ENST00000590096 LILRA6Q6PI73 481 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 SPATA31D4Q6ZUB0 917 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 TMEM86AQ8N2M4 240 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 HDAC7Q8WUI4 952 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 MMS19Q96T76 1030 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 TMEM8AQ9HCN3 771 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 TMEM63CQ9P1W3 806 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 L1RE1Q9UN81 338 aa22.88■■□□□ 1.25
ATG4D-212ENST00000590096 MTCL1Q9Y4B5 1905 aaKnown RBP22.87■■□□□ 1.25
ATG4D-212ENST00000590096 VNN1O95497 513 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 STAU1O95793 577 aaKnown RBP22.87■■□□□ 1.25
ATG4D-212ENST00000590096 ERCC5P28715 1186 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-212ENST00000590096 MCCD1P59942 119 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-212ENST00000590096 KLHL40Q2TBA0 621 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 WDR72Q3MJ13 1102 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 CT47A1Q5JQC4 288 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-212ENST00000590096 KRT39Q6A163 491 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 DPH6Q7L8W6 267 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 PDCL2Q8N4E4 241 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 KREMEN2Q8NCW0 462 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 SPATA18Q8TC71 538 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 SFXN1Q9H9B4 322 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 FBXW11Q9UKB1 542 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 FAM50BQ9Y247 325 aa22.87■■□□□ 1.25
ATG4D-212ENST00000590096 HLA-DRAP01903 254 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 MXI1P50539 228 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 SMAD4Q13485 552 aaKnown RBP22.86■■□□□ 1.25
ATG4D-212ENST00000590096 SGSM1Q2NKQ1 1148 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 LIN9Q5TKA1 542 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms