RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 C8AP07357 584 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 KRT19P08727 400 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 DLATP10515 647 aaKnown RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 POLR2BP30876 1174 aaKnown RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 CLDN10P78369 228 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 ENPEPQ07075 957 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 SMARCB1Q12824 385 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 EDRF1Q3B7T1 1238 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 DPH6Q7L8W6 267 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 TCEAL8Q8IYN2 117 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 TMEM86AQ8N2M4 240 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 SMG7Q92540 1137 aaKnown RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 CCDC127Q96BQ5 260 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 BORCS6Q96GS4 357 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 GDAP2Q9NXN4 497 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 MAPK8IP1Q9UQF2 711 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 TIMM13Q9Y5L4 95 aaPredicted RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 IKBKBO14920 756 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 HUS1O60921 280 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 CPB1P15086 417 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 NR2F2P24468 414 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 PRCPP42785 496 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 ARPP19P56211 112 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 GPR17Q13304 367 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 ADAM9Q13443 819 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 STIM1Q13586 685 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 CEP135Q66GS9 1140 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 CENPPQ6IPU0 288 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 OTOP3Q7RTS5 596 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 TRAPPC11Q7Z392 1133 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 TOP6BLQ8N6T0 577 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 OR5B17Q8NGF7 314 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 ZNF707Q96C28 371 aaPredicted RBP10.88□□□□□ -0.67
TPM4-207ENST00000588032 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
TPM4-207ENST00000588032 HPDLQ96IR7 371 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 RPGRIP1Q96KN7 1286 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 TSG101Q99816 390 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 POMKQ9H5K3 350 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 WDR6Q9NNW5 1121 aaKnown RBP10.88□□□□□ -0.67
TPM4-207ENST00000588032 HSFX1Q9UBD0 423 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 SIX4Q9UIU6 781 aa10.88□□□□□ -0.67
TPM4-207ENST00000588032 TCF20Q9UGU0 1960 aaKnown RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 PRRG1O14668 218 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 PHACTR2O75167 634 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 RFPL2O75678 378 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 KRT13P13646 458 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 ALADP13716 330 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 ATICP31939 592 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 PSMC2P35998 433 aaKnown RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 LHX1P48742 406 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 BFSP1Q12934 665 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 TRPC3Q13507 836 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 ZCWPW2Q504Y3 356 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 WSCD1Q658N2 575 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 INTS8Q75QN2 995 aaKnown RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 C2orf15Q8WU43 125 aaKnown RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 DHTKD1Q96HY7 919 aaPredicted RBP10.87□□□□□ -0.67
TPM4-207ENST00000588032 GBP4Q96PP9 640 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 CYP4F11Q9HBI6 524 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 CD320Q9NPF0 282 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM4-207ENST00000588032 SNX9Q9Y5X1 595 aa10.87□□□□□ -0.67
TPM4-207ENST00000588032 PTPRJQ12913 1337 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 BRWD1Q9NSI6 2320 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 VWA8A3KMH1 1905 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 PSMA7O14818 248 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 CETN3O15182 167 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 LRG1P02750 347 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 CASP4P49662 377 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 VAMP7P51809 220 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 MCCD1P59942 119 aaPredicted RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 FKBP3Q00688 224 aaKnown RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 LRRC63Q05C16 580 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 PLD1Q13393 1074 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 FOXR2Q6PJQ5 311 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 FAM186BQ8IYM0 893 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 SMYD4Q8IYR2 804 aaPredicted RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 DCP1BQ8IZD4 617 aaKnown RBP10.86□□□□□ -0.67
TPM4-207ENST00000588032 ZDHHC14Q8IZN3 488 aa10.86□□□□□ -0.67
TPM4-207ENST00000588032 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms