RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TMEM150BA6NC51 233 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 ATP9AO75110 1047 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 ASMTLO95671 621 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 POLGP54098 1239 aaPredicted RBP19.66■□□□□ 0.74
DDX39A-206ENST00000587730 CLNS1AP54105 237 aaKnown RBP19.66■□□□□ 0.74
DDX39A-206ENST00000587730 CENPUQ71F23 418 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 VSIG10LQ86VR7 867 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 CYP4X1Q8N118 509 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 CPXCR1Q8N123 301 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 AGBL3Q8NEM8 1001 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 TBC1D31Q96DN5 1066 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 TMEM237Q96Q45 408 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 HERPUD2Q9BSE4 406 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 PI4K2AQ9BTU6 479 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 HEMGNQ9BXL5 484 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 RAVER2Q9HCJ3 691 aaKnown RBP19.66■□□□□ 0.74
DDX39A-206ENST00000587730 GABBR1Q9UBS5 961 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 PCDHB4Q9Y5E5 795 aa19.66■□□□□ 0.74
DDX39A-206ENST00000587730 E7ENQ6 273 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 VPS41P49754 854 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 CCNG1P51959 295 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 PDE4CQ08493 712 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 TMED2Q15363 201 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ALLCQ8N6M5 410 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 CFAP61Q8NHU2 1237 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ZNF398Q8TD17 642 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 NKD2Q969F2 451 aaPredicted RBP19.65■□□□□ 0.74
DDX39A-206ENST00000587730 C11orf70Q9BRQ4 267 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 GLIS2Q9BZE0 524 aaPredicted RBP19.65■□□□□ 0.74
DDX39A-206ENST00000587730 IMPG2Q9BZV3 1241 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 TMEM39BQ9GZU3 492 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 LRMDAQ9H2I8 198 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 SAYSD1Q9NPB0 183 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 AGO2Q9UKV8 859 aaKnown RBP19.65■□□□□ 0.74
DDX39A-206ENST00000587730 EFR3BQ9Y2G0 817 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 UTRNP46939 3433 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ANP32DO95626 131 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 GH1P01241 217 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 TAS2R40P59535 323 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ZKSCAN8Q15776 578 aaPredicted RBP19.65■□□□□ 0.74
DDX39A-206ENST00000587730 PDK4Q16654 411 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 DENND1AQ8TEH3 1009 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 AGAP11Q8TF27 550 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ZNF516Q92618 1163 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 C9orf72Q96LT7 481 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 SH2D3AQ9BRG2 576 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 TRABDQ9H4I3 376 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 CYP26B1Q9NR63 512 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 TBK1Q9UHD2 729 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ZNF148Q9UQR1 794 aa19.65■□□□□ 0.74
DDX39A-206ENST00000587730 ALOX15BO15296 676 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 STBD1O95210 358 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 ITGAVP06756 1048 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 TSHRP16473 764 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 MMP8P22894 467 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 PHBP35232 272 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 SSR1P43307 286 aaKnown RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 PIGHQ14442 188 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 CCDC142Q17RM4 750 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 XKR3Q5GH77 459 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 TDRD10Q5VZ19 366 aaKnown RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 RBBP8NLQ8NC74 664 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 SLITRK1Q96PX8 696 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 LRRC37BQ96QE4 947 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 CGRRF1Q99675 332 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 POLR3FQ9H1D9 316 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 PCDH9Q9HC56 1237 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 DNAJC17Q9NVM6 304 aaKnown RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-206ENST00000587730 PGAP2Q9UHJ9 254 aa19.64■□□□□ 0.73
DDX39A-206ENST00000587730 ZWINTO95229 277 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 LUC7L3O95232 432 aaKnown RBP19.63■□□□□ 0.73
DDX39A-206ENST00000587730 KRT16P08779 473 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 OAZ1P54368 228 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 RNASELQ05823 741 aaKnown RBP19.63■□□□□ 0.73
DDX39A-206ENST00000587730 MYO1EQ12965 1108 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 MIS18BP1Q6P0N0 1132 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 ECHDC2Q86YB7 292 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 LRRC8CQ8TDW0 803 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 SH3TC2Q8TF17 1288 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 NSMCE1Q8WV22 266 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 MIEF2Q96C03 454 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 STAMBPL1Q96FJ0 436 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
DDX39A-206ENST00000587730 PSMC3IPQ9P2W1 217 aaPredicted RBP19.63■□□□□ 0.73
DDX39A-206ENST00000587730 TMEM191CA6NGB0 347 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 KRT1P04264 644 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TMEM191BP0C7N4 346 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 CETPP11597 493 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 DSG3P32926 999 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ARSEP51690 589 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 VCPP55072 806 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 WDR4P57081 412 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 GRM1Q13255 1194 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 LLGL1Q15334 1064 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TMEM63BQ5T3F8 832 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 CGB2Q6NT52 195 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 CYP4F22Q6NT55 531 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms