RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 IQCEQ6IPM2 695 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
TPM4-206ENST00000587201 METTL23Q86XA0 190 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 GRAMD1CQ8IYS0 662 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 CHAMP1Q96JM3 812 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 ZNF512Q96ME7 567 aaPredicted RBP19.11■□□□□ 0.65
TPM4-206ENST00000587201 ZNF560Q96MR9 790 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 PDE11AQ9HCR9 933 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 ZNF318Q5VUA4 2279 aa19.11■□□□□ 0.65
TPM4-206ENST00000587201 A0A1B0GVL5 298 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 PVALEFA0A1B0GWK0 134 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 KPNA7A9QM74 516 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 ITGB3P05106 788 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 CYP11A1P05108 521 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 SLFN14P0C7P3 912 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 SRFP11831 508 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
TPM4-206ENST00000587201 HOXD13P35453 343 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 PNPLA4P41247 253 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 SLC5A9Q2M3M2 681 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 PARM1Q6UWI2 310 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 MTSS1LQ765P7 747 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
TPM4-206ENST00000587201 NPAS3Q8IXF0 933 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 NELFCDQ8IXH7 590 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 FLCNQ8NFG4 579 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 FGF14Q92915 247 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 MCRS1Q96EZ8 462 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 TMEM209Q96SK2 561 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 SLC39A2Q9NP94 309 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 AVENQ9NQS1 362 aaPredicted RBP19.1■□□□□ 0.65
TPM4-206ENST00000587201 HSPBP1Q9NZL4 362 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 AGAP1Q9UPQ3 857 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 YIPF1Q9Y548 306 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 ATP6V1DQ9Y5K8 247 aa19.1■□□□□ 0.65
TPM4-206ENST00000587201 UBE4BO95155 1302 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 ZNF233A6NK53 670 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 ZNF197O14709 1029 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 VNN2O95498 520 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 TMEM191BP0C7N4 346 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 PFKFB1P16118 471 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 CMA1P23946 247 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 EHHADHQ08426 723 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 DUSP4Q13115 394 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 CYP4A22Q5TCH4 519 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 SIX5Q8N196 739 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 THEM5Q8N1Q8 247 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 CSGALNACT2Q8N6G5 542 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 C1orf127Q8N9H9 656 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 PRRX2Q99811 253 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 RPP25Q9BUL9 199 aaKnown RBP19.09■□□□□ 0.65
TPM4-206ENST00000587201 CEP72Q9P209 647 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 WNT16Q9UBV4 365 aa19.09■□□□□ 0.65
TPM4-206ENST00000587201 ZDBF2Q9HCK1 2354 aa19.08■□□□□ 0.65
TPM4-206ENST00000587201 SCN1AP35498 2009 aa19.08■□□□□ 0.65
TPM4-206ENST00000587201 MTMR11A4FU01 709 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 CLIC2O15247 247 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 ACTN4O43707 911 aaKnown RBP19.08■□□□□ 0.64
TPM4-206ENST00000587201 KRT19P08727 400 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 CEBPBP17676 345 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 PLD1Q13393 1074 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 BECN1Q14457 450 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 SURF1Q15526 300 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 PRSS36Q5K4E3 855 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 WSCD1Q658N2 575 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 LMBRD2Q68DH5 695 aaPredicted RBP19.08■□□□□ 0.64
TPM4-206ENST00000587201 ASTLQ6HA08 431 aaPredicted RBP19.08■□□□□ 0.64
TPM4-206ENST00000587201 CENPPQ6IPU0 288 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 CBWD2Q8IUF1 395 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 HS6ST3Q8IZP7 471 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 ATAD1Q8NBU5 361 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 PRSS33Q8NF86 280 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 OR10T2Q8NGX3 314 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 GPR152Q8TDT2 470 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 SCFD1Q8WVM8 642 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 TCEAL4Q96EI5 215 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 BORCS6Q96GS4 357 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 PAGE5Q96GU1 130 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 ANKRD36BP1Q96IX9 119 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 FAM84AQ96KN4 292 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 MTMR12Q9C0I1 747 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 CRISPLD1Q9H336 500 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 KIAA1586Q9HCI6 787 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 ASAH2Q9NR71 780 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 GDE1Q9NZC3 331 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 ITGA11Q9UKX5 1188 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 CA14Q9ULX7 337 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 SLC27A5Q9Y2P5 690 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 R3HCC1Q9Y3T6 440 aaKnown RBP19.08■□□□□ 0.64
TPM4-206ENST00000587201 NOTCH4Q99466 2003 aa19.08■□□□□ 0.64
TPM4-206ENST00000587201 TGFB1I1O43294 461 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 MYL4P12829 197 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 ALDH1A3P47895 512 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 BFSP1Q12934 665 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 SLC39A12Q504Y0 691 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 HS2ST1Q7LGA3 356 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 RDH13Q8NBN7 331 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 KXD1Q9BQD3 176 aa19.07■□□□□ 0.64
TPM4-206ENST00000587201 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms