RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 NYAP1Q6ZVC0 841 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 GPIHBP1Q8IV16 184 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 GLYCTKQ8IVS8 523 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 FAM126BQ8IXS8 530 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 TMEM192Q8IY95 271 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 FAM71AQ8IYT1 594 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 RPUSD2Q8IZ73 545 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 RNF10Q8N5U6 811 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 C1orf127Q8N9H9 656 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 MNS1Q8NEH6 495 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 HELQQ8TDG4 1101 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 EPS8L1Q8TE68 723 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 IPO4Q8TEX9 1081 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 ZNF516Q92618 1163 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 UROC1Q96N76 676 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 NAPGQ99747 312 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 ADAM2Q99965 735 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 TUBB2BQ9BVA1 445 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 MIS12Q9H081 205 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 SNX25Q9H3E2 840 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CDHR5Q9HBB8 845 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ERVK-5Q9HDB9 667 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 RRAGDQ9NQL2 400 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 LCMT1Q9UIC8 334 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 NAGPAQ9UK23 515 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 HES2Q9Y543 173 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 NUB1Q9Y5A7 615 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 SCINQ9Y6U3 715 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 A0A087X0T9 212 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 TMCO5BA8MYB1 307 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 PJA2O43164 708 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 URI1O94763 535 aaPredicted RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 SGPL1O95470 568 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 LSM8O95777 96 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 EOMESO95936 686 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 PAEPP09466 180 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 TMEM253P0C7T8 217 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 FAM228BP0C875 321 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 ODC1P11926 461 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 GZMAP12544 262 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 KCNE1P15382 129 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 ABCB4P21439 1286 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 HOXA11P31270 313 aaPredicted RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 RFC2P35250 354 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 RNASELQ05823 741 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 CKAP4Q07065 602 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 LPIN1Q14693 890 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 MTFR1Q15390 333 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 SPOPLQ6IQ16 392 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 SLC24A5Q71RS6 500 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 ZNF571Q7Z3V5 609 aaPredicted RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 IRF2BP2Q7Z5L9 587 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 METTL23Q86XA0 190 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 REXO1L1PQ8IX06 675 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 TMEM35BQ8NCS4 154 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 APPL2Q8NEU8 664 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 RFFLQ8WZ73 363 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 TATDN2Q93075 761 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 ZNF653Q96CK0 615 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 DDX27Q96GQ7 796 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 ZNF333Q96JL9 665 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 TNIP3Q96KP6 325 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 KREMEN1Q96MU8 473 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 NT5C1AQ9BXI3 368 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 MRPL9Q9BYD2 267 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 TRPV6Q9H1D0 765 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 HIPK3Q9H422 1215 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 C11orf49Q9H6J7 331 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 SYNCQ9H7C4 482 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 VRTNQ9H8Y1 702 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 MRPL47Q9HD33 250 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 CISHQ9NSE2 258 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 RYDENQ9NUL5 291 aaKnown RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 KLK14Q9P0G3 267 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 KANSL3Q9P2N6 904 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 HESX1Q9UBX0 185 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 AJAP1Q9UKB5 411 aaPredicted RBP6.6□□□□□ -1.35
LIG3-206ENST00000586058 KIAA1257Q9ULG3 409 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 STRIP2Q9ULQ0 834 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 ATP11BQ9Y2G3 1177 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 SNX9Q9Y5X1 595 aa6.6□□□□□ -1.35
LIG3-206ENST00000586058 NCANO14594 1321 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 GRIN2DO15399 1336 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 A0A0U1RQF3 1178 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 SMIM28A0A1B0GU29 152 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CARNS1A5YM72 827 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 BTNL10A8MVZ5 291 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 A8MXQ7 604 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 KPNA7A9QM74 516 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ZNF623O75123 536 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CALB1P05937 261 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CLTBP09497 229 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms