RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.36
SS18-226ENST00000585241 IGFBP6P24592 240 aaPredicted RBP17.27■□□□□ 0.36
SS18-226ENST00000585241 ASIC2Q16515 512 aa17.27■□□□□ 0.36
SS18-226ENST00000585241 SOWAHAQ2M3V2 549 aa17.27■□□□□ 0.36
SS18-226ENST00000585241 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
SS18-226ENST00000585241 SCARA5Q6ZMJ2 495 aa17.27■□□□□ 0.36
SS18-226ENST00000585241 MTIF3Q9H2K0 278 aaKnown RBP17.27■□□□□ 0.36
SS18-226ENST00000585241 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
SS18-226ENST00000585241 L1RE1Q9UN81 338 aa17.27■□□□□ 0.36
SS18-226ENST00000585241 SSU72P8A0A1W2PR75 194 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 CARNS1A5YM72 827 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 M0QZQ0 153 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 CILPO75339 1184 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 B3GAT3O94766 335 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 GFPT2O94808 682 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 CLSTN1O94985 981 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 KIF4AO95239 1232 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 SERPING1P05155 500 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 GALTP07902 379 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 CLCN1P35523 988 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 SLC11A1P49279 550 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
SS18-226ENST00000585241 TIGD5Q53EQ6 642 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 KBTBD7Q8WVZ9 684 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 SUSD3Q96L08 255 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 BAG1Q99933 345 aaPredicted RBP17.26■□□□□ 0.35
SS18-226ENST00000585241 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 MARCH5Q9NX47 278 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 ARHGAP20Q9P2F6 1191 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
SS18-226ENST00000585241 BARX2Q9UMQ3 279 aaPredicted RBP17.26■□□□□ 0.35
SS18-226ENST00000585241 BZW2Q9Y6E2 419 aaKnown RBP17.26■□□□□ 0.35
SS18-226ENST00000585241 NRP1O14786 923 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 HUS1O60921 280 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 CYP11A1P05108 521 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 WARSP23381 471 aaKnown RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 ANXA13P27216 316 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 PAN2Q504Q3 1202 aaKnown RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 UNC93AQ86WB7 457 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 TMEM86AQ8N2M4 240 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 PDCL2Q8N4E4 241 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 RBBP8NLQ8NC74 664 aaPredicted RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 SP7Q8TDD2 431 aaPredicted RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 WHAMMQ8TF30 809 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 MMS19Q96T76 1030 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 MRPL45Q9BRJ2 306 aaKnown RBP17.25■□□□□ 0.35
SS18-226ENST00000585241 PCDHB4Q9Y5E5 795 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 SLC4A7Q9Y6M7 1214 aa17.25■□□□□ 0.35
SS18-226ENST00000585241 TSC2P49815 1807 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 ARHGEF37A1IGU5 675 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 CYB561D2O14569 222 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 GABRDO14764 452 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 CYP26A1O43174 497 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 NRDCO43847 1150 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 EFEMP2O95967 443 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 ALDH2P05091 517 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 ITGB1P05556 798 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 PAEPP09466 180 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 KRT5P13647 590 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 CD58P19256 250 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 TYMPP19971 482 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 OR1G1P47890 313 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 CDH8P55286 799 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 BPIFB4P59827 614 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 KLHL30Q0D2K2 578 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 TMEM270Q6UE05 265 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 HERC6Q8IVU3 1022 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 OLIG1Q8TAK6 271 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 EPS8L1Q8TE68 723 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 CHP1Q99653 195 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 COLEC11Q9BWP8 271 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 NOCTQ9UK39 431 aaKnown RBP17.24■□□□□ 0.35
SS18-226ENST00000585241 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 NME7Q9Y5B8 376 aa17.24■□□□□ 0.35
SS18-226ENST00000585241 F8W810 466 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 LINC00271P0C7V0 271 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 ODC1P11926 461 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 LAG3P18627 525 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 BRCC3P46736 316 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 RAD23BP54727 409 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 BCAR1P56945 870 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
SS18-226ENST00000585241 ASTE1Q2TB18 679 aaPredicted RBP17.23■□□□□ 0.35
SS18-226ENST00000585241 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 DSTYKQ6XUX3 929 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 CCDC170Q8IYT3 715 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 TWNKQ96RR1 684 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 YME1L1Q96TA2 773 aa17.23■□□□□ 0.35
SS18-226ENST00000585241 GDF15Q99988 308 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms