RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ENPEPQ07075 957 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 AGBL2Q5U5Z8 902 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 YTHDF3Q7Z739 585 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RSPH3Q86UC2 560 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CEP120Q8N960 986 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM84AQ96KN4 292 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CPSF3Q9UKF6 684 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PLAAQ9Y263 795 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 UTP11Q9Y3A2 253 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ZSCAN5CA6NGD5 496 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 M0QZ92 97 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TRIM66O15016 1216 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MCF2P10911 925 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TNNI1P19237 187 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TNFAIP3P21580 790 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DRG2P55039 364 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 EIF3BP55884 814 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 KRT39Q6A163 491 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 BRSK2Q8IWQ3 736 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 LNX1Q8TBB1 728 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SLC35G2Q8TBE7 412 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DEFB118Q96PH6 123 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TRMT13Q9NUP7 481 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CDY2AQ9Y6F7 541 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ANK1P16157 1881 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GOLGA6L10A0A0M3HER8 536 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM187AA6NFU0 413 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 KBTBD13C9JR72 458 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CCL5P13501 91 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GTF2H1P32780 548 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 HSD17B3P37058 310 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MDH1P40925 334 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CCT5P48643 541 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DNA2P51530 1060 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 EPC2Q52LR7 807 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 LMO3Q8TAP4 145 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RNF208Q9H0X6 261 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TRPV2Q9Y5S1 764 aa15.99■□□□□ 0.15
CDK5RAP3-236ENST00000584991 H0YGN5 161 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NDUFAB1O14561 156 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 LRRN2O75325 713 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CTSHP09668 335 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 LSP1P33241 339 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CLDN10P78369 228 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 POU5F1Q01860 360 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DHX34Q14147 1143 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GJB7Q6PEY0 223 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SV2AQ7L0J3 742 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CROCCP2Q86T23 111 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TADA2BQ86TJ2 420 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 OLIG1Q8TAK6 271 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ZBTB9Q96C00 473 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ADPGKQ9BRR6 497 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NFS1Q9Y697 457 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM169AQ9Y6X4 670 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
CDK5RAP3-236ENST00000584991 STAG3L1P0CL83 205 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 THPOP40225 353 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CEP85LQ5SZL2 805 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 C11orf63Q6NUN7 778 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RPS6KC1Q96S38 1066 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CGRRF1Q99675 332 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GPR88Q9GZN0 384 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 BUB1BO60566 1050 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NPTXRO95502 500 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CHRNA1P02708 482 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 HSPA8P11142 646 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GZMAP12544 262 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CTNNA1P35221 906 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PTK7Q13308 1070 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TTC31Q49AM3 519 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NOTUMQ6P988 496 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RPAINQ86UA6 219 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GLYCTKQ8IVS8 523 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms