RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 BTBD7Q9P203 1132 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNHIT2Q9UHR6 403 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 OAZ3Q9UMX2 235 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 GTF2A1LQ9UNN4 478 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 DNM3Q9UQ16 869 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 A0A087X1B8 175 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SCDO00767 359 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 GLRX3O76003 335 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 AMHP03971 560 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 HRGP04196 525 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MAPK9P45984 424 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MAPK10P53779 464 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 POU5F1BQ06416 359 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TUBA3CQ13748 450 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TTC38Q5R3I4 469 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ABHD17CQ6PCB6 329 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TUBA3EQ6PEY2 450 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SRLQ86TD4 932 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC33Q8N5R6 958 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 C7orf31Q8N865 590 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PIP4K2CQ8TBX8 421 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MTFMTQ96DP5 389 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CDK5RAP3Q96JB5 506 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 HIST1H2AHQ96KK5 128 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 HIST1H2AJQ99878 128 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SELENOOQ9BVL4 669 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ZDHHC5Q9C0B5 715 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IPPKQ9H8X2 491 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 FAM184BQ9ULE4 1060 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ALPK3Q96L96 1907 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RPTORQ8N122 1335 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC66A2RUB6 948 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TRIM75PA6NK02 468 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CBX4O00257 560 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC27A2O14975 620 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TRIM24O15164 1050 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 KDM1AO60341 852 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CSF2RBP32927 897 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IL6STP40189 918 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CDK7P50613 346 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PFKPQ01813 784 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TEFQ10587 303 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 NOGQ13253 232 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ELF2Q15723 593 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TIGD2Q4W5G0 525 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ALFQ53S48 1182 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TAX1BP1Q86VP1 789 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MAML3Q96JK9 1138 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 C16orf92Q96LL3 132 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RBM15Q96T37 977 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PTPN18Q99952 460 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF747Q9BV97 191 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 C1QTNF1Q9BXJ1 281 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 KMT5AQ9NQR1 393 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IRAK4Q9NWZ3 460 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MTMR10Q9NXD2 777 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 C11orf21Q9P2W6 132 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 WASF3Q9UPY6 502 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 F5H0A9 414 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IFRD1O00458 451 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TBX3O15119 743 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IPO8O15397 1037 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 F2P00734 622 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MTHFD2P13995 350 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 DPEP1P16444 411 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ADCYAP1R1P41586 468 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC5A3P53794 718 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 EPHA5P54756 1037 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 GTF2H3Q13889 308 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 LLGL1Q15334 1064 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PCBP2Q15366 365 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ALDH1L2Q3SY69 923 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TMEM177Q53S58 311 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC35F1Q5T1Q4 408 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 STYK1Q6J9G0 422 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CC2D1AQ6P1N0 951 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SYCE2Q6PIF2 218 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNV1Q6PIU1 500 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 ARHGAP36Q6ZRI8 547 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 LCORLQ8N3X6 602 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 IL17RAQ96F46 866 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 FAXDC2Q96IV6 333 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC138Q96M89 665 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MENTQ9BUN1 341 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 NLRC4Q9NPP4 1024 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 HYPKQ9NX55 129 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 POLKQ9UBT6 870 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MINPP1Q9UNW1 487 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RTL9Q8NET4 1388 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SNED1Q8TER0 1413 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 COL1A1P02452 1464 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 A0A1B0GTL3 188 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PMM2O15305 246 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PRICKLE3O43900 615 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PHKG2P15735 406 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TNFRSF1AP19438 455 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC9A1P19634 815 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ACO1P21399 889 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CD40P25942 277 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms