RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 PTPN2P17706 415 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 FSHRP23945 695 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 GUCY2FP51841 1108 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 NUCB2P80303 420 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 CUL4BQ13620 913 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 SV2CQ496J9 727 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 GRASPQ7Z6J2 395 aaPredicted RBP10.69□□□□□ -0.7
SKA2-208ENST00000583927 LEMD2Q8NC56 503 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 HPS3Q969F9 1004 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 SAAL1Q96ER3 474 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 MYADMQ96S97 322 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 AGPAT3Q9NRZ7 376 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 GDAP2Q9NXN4 497 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 GDE1Q9NZC3 331 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 HSPBP1Q9NZL4 362 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 CDH7Q9ULB5 785 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 DUSP12Q9UNI6 340 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
SKA2-208ENST00000583927 KPNA7A9QM74 516 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 PRRG1O14668 218 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 CCL16O15467 120 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 SEC24AO95486 1093 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 LRG1P02750 347 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 GBP2P32456 591 aaPredicted RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 SYKP43405 635 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 AFMP43652 599 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 NUBP1P53384 320 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 EPHA5P54756 1037 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 WNT7BP56706 349 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 HTR4Q13639 388 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 KNOP1Q1ED39 458 aaKnown RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 PABPC1LQ4VXU2 614 aaKnown RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 MTSS1LQ765P7 747 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 WDR49Q8IV35 697 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 SLC9A9Q8IVB4 645 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 TMEM86AQ8N2M4 240 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 TMEM130Q8N3G9 435 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 C1orf127Q8N9H9 656 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 PBXIP1Q96AQ6 731 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 PRRX2Q99811 253 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 BLZF1Q9H2G9 400 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 PCIF1Q9H4Z3 704 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 CYP4F11Q9HBI6 524 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 INTS13Q9NVM9 706 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 DNMT3BQ9UBC3 853 aaKnown RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 INSL5Q9Y5Q6 135 aa10.68□□□□□ -0.7
SKA2-208ENST00000583927 KIF26AQ9ULI4 1882 aaPredicted RBP10.68□□□□□ -0.7
SKA2-208ENST00000583927 CYB561D2O14569 222 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ZNF197O14709 1029 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 PRPF40AO75400 957 aaKnown RBP10.67□□□□□ -0.7
SKA2-208ENST00000583927 VNN2O95498 520 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ASGR2P07307 311 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 RHOP08100 348 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 CPB1P15086 417 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 CASP1P29466 404 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 NDUFA8P51970 172 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 TFAMQ00059 246 aaKnown RBP10.67□□□□□ -0.7
SKA2-208ENST00000583927 ADCY1Q08828 1119 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 PLD1Q13393 1074 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 SNRNP35Q16560 246 aaKnown RBP10.67□□□□□ -0.7
SKA2-208ENST00000583927 DUOXA2Q1HG44 320 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 PRSS36Q5K4E3 855 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 CENPPQ6IPU0 288 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 GET4Q7L5D6 327 aaPredicted RBP10.67□□□□□ -0.7
SKA2-208ENST00000583927 DPH6Q7L8W6 267 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 LIMS2Q7Z4I7 341 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 METTL23Q86XA0 190 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ELMOD1Q8N336 334 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 XXYLT1Q8NBI6 393 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 FGF13Q92913 245 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ANKRD36BP1Q96IX9 119 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ZCWPW1Q9H0M4 648 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 DMAC2Q9NW81 257 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 WNT16Q9UBV4 365 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 SIX4Q9UIU6 781 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 ASB3Q9Y575 518 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 TIMM13Q9Y5L4 95 aaPredicted RBP10.67□□□□□ -0.7
SKA2-208ENST00000583927 F5P12259 2224 aa10.67□□□□□ -0.7
SKA2-208ENST00000583927 MTMR11A4FU01 709 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 GOLGA8IPA6NC78 632 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 GOLGA8JA6NMD2 632 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 PDXKO00764 312 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 RHOBTB3O94955 611 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 KIF20AO95235 890 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 ITGB3P05106 788 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 FAM163BP0C2L3 166 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 TMEM191BP0C7N4 346 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 SRFP11831 508 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 POLR2BP30876 1174 aaKnown RBP10.66□□□□□ -0.7
SKA2-208ENST00000583927 ARPP19P56211 112 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 CLDN10P78369 228 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms