RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 AGXTP21549 392 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 EPHB2P29323 1055 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 ERVK-21P61565 698 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 SLC44A4Q53GD3 710 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 SUMO4Q6EEV6 95 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF365Q70YC5 407 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 NSUN7Q8NE18 718 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 NRG4Q8WWG1 115 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 VKORC1Q9BQB6 163 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 SLC45A2Q9UMX9 530 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 GPR45Q9Y5Y3 372 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 BRINP1O60477 761 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 PRKD3O94806 890 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 BMP15O95972 392 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 RHOP08100 348 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 MTHFD1P11586 935 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 SFPQP23246 707 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 STAT4Q14765 748 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 ATP2B3Q16720 1220 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 LHFPL2Q6ZUX7 228 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 NOP9Q86U38 636 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 UBR7Q8N806 425 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 B3GALNT2Q8NCR0 500 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 POC1BQ8TC44 478 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 C7orf25Q9BPX7 421 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 TBX22Q9Y458 520 aa4.73□□□□□ -1.65
SMCHD1-206ENST00000581631 SPATA31A3Q5VYP0 1347 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 K7ESF4 209 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 TOR1BO14657 336 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF213O14771 459 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 TTLL1O95922 423 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 HNRNPCP07910 306 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 LPOP22079 712 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 NPTX2P47972 431 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 GYS2P54840 703 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 FAPQ12884 760 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 FAM153CQ494X1 144 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 CAMKK1Q8N5S9 505 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 RAB24Q969Q5 203 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 AHCYL2Q96HN2 611 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 SLC2A13Q96QE2 648 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 ALG8Q9BVK2 526 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 BHMT2Q9H2M3 363 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF521Q96K83 1311 aa4.72□□□□□ -1.65
SMCHD1-206ENST00000581631 TISP43B9A030 160 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 TOP3BO95985 862 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 JUPP14923 745 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 CCT8P50990 548 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 CDC42EP1Q00587 391 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 PREPLQ4J6C6 727 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 TMEM119Q4V9L6 283 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 TAPT1Q6NXT6 567 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 GIMAP6Q6P9H5 292 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 TECPR1Q7Z6L1 1165 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 YTHDF3Q7Z739 585 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 FAM9AQ8IZU1 332 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 FBXO41Q8TF61 875 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 TMX3Q96JJ7 454 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 MRGPRX4Q96LA9 322 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 OSBPL9Q96SU4 736 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 WACQ9BTA9 647 aa4.71□□□□□ -1.66
SMCHD1-206ENST00000581631 MYO1FO00160 1098 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 NR2F6P10588 404 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 CERS1P27544 350 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 ZNF280AP59817 542 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 TMPRSS15P98073 1019 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 PIGFQ07326 219 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 SUPT20HL1Q3ZLR7 823 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 KLHL22Q53GT1 634 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 FAM109AQ8N4B1 249 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 RGMAQ96B86 450 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 DMRTA2Q96SC8 542 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 QTRT1Q9BXR0 403 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 AMBRA1Q9C0C7 1298 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 CAAP1Q9H8G2 361 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 ETAA1Q9NY74 926 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 DKK3Q9UBP4 350 aa4.7□□□□□ -1.66
SMCHD1-206ENST00000581631 A0A0B4J269 797 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 TLDC2A0PJX2 215 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 ADAMTS3O15072 1205 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 SGTAO43765 313 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 MPGP29372 298 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 TLE1Q04724 770 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 TUBB3Q13509 450 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 CEP78Q5JTW2 689 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 SLC9A4Q6AI14 798 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 TRIB1Q96RU8 372 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 PACSIN1Q9BY11 444 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 ADGRE3Q9BY15 652 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 IMPG2Q9BZV3 1241 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 NRIP3Q9NQ35 241 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 EHD3Q9NZN3 535 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 TUBD1Q9UJT1 453 aa4.69□□□□□ -1.66
SMCHD1-206ENST00000581631 INTUQ9ULD6 942 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms