RNA–Protein interactions for RNA: ENST00000580976.1

RHOT1-208, Transcript of ras homolog family member T1, human

TSL 4

Gene RHOT1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-208	ENST00000580976	TMEM127	O75204	238 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	SEMA7A	O75326	666 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	APOL3	O95236	402 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	KRT1	P04264	644 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	IL1R1	P14778	569 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	PRDX5	P30044	214 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	HOXD13	P35453	343 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	LIMS1	P48059	325 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	RPS16	P62249	146 aa	Known RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	DLG4	P78352	724 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	ATP8B2	P98198	1209 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	MEF2A	Q02078	507 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	RTP5	Q14D33	572 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	KHDC1L	Q5JSQ8	128 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	PHF19	Q5T6S3	580 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	PRAMEF9	Q5VWM5	478 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	SULT6B1	Q6IMI4	303 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	TMC5	Q6UXY8	1006 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CD300LD	Q6UXZ3	194 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	KIAA0408	Q6ZU52	694 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976		Q6ZVL8	140 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	ENOSF1	Q7L5Y1	443 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	KRT28	Q7Z3Y7	464 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CELF5	Q8N6W0	485 aa	Known RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	OR1N1	Q8NGS0	311 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	TDRD7	Q8NHU6	1098 aa	Known RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CFHR4	Q92496	578 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	RSC1A1	Q92681	617 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CYFIP2	Q96F07	1278 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	NEIL1	Q96FI4	390 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	KCNC2	Q96PR1	638 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	VRK1	Q99986	396 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	GORASP1	Q9BQQ3	440 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	RNPEP	Q9H4A4	650 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	SLC39A2	Q9NP94	309 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CWC25	Q9NXE8	425 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	RGL1	Q9NZL6	768 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	ORC3	Q9UBD5	711 aa	Predicted RBP	4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	FTSJ1	Q9UET6	329 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CAPN11	Q9UMQ6	739 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	PCDHA6	Q9UN73	950 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	PASK	Q96RG2	1323 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976		A0A087WZ62	844 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PI4KAP2	A4QPH2	592 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ZNF839	A8K0R7	811 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	N4BP3	O15049	544 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	AHCYL1	O43865	530 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	NRP2	O60462	931 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	TNFRSF6B	O95407	300 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PLA2G1B	P04054	148 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ADRB2	P07550	413 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	MYCL	P12524	364 aa	Predicted RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	MYL4	P12829	197 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	KRT20	P35900	424 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PAPOLA	P51003	745 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	CASP6	P55212	293 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	SESN2	P58004	480 aa	Predicted RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	UBE3A	Q05086	875 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	NOMO1	Q15155	1222 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	UBE3C	Q15386	1083 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ADCK5	Q3MIX3	580 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	NRN1L	Q496H8	165 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	C19orf54	Q5BKX5	351 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	MAP3K21	Q5TCX8	1036 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PLBD1	Q6P4A8	553 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	FAM180A	Q6UWF9	173 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	BMP8A	Q7Z5Y6	402 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ANKS1B	Q7Z6G8	1248 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	B3GNT8	Q7Z7M8	397 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	STK32C	Q86UX6	486 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	RHOT1	Q8IXI2	618 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	TMEFF1	Q8IYR6	380 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	ADGRG2	Q8IZP9	1017 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	HIPK4	Q8NE63	616 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	SSH3	Q8TE77	659 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	NSUN4	Q96CB9	384 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PAIP1	Q9H074	479 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	CHST8	Q9H2A9	424 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PABPC3	Q9H361	631 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	MLXIP	Q9HAP2	919 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	SARS2	Q9NP81	518 aa	Known RBP	4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	KCND1	Q9NSA2	647 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	TDP1	Q9NUW8	608 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	IRAK4	Q9NWZ3	460 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	USP18	Q9UMW8	372 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	FRMD4B	Q9Y2L6	1034 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	PAXBP1	Q9Y5B6	917 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	RPTOR	Q8N122	1335 aa		4.9	□□□□□ -1.63
RHOT1-208	ENST00000580976	SYNDIG1L	A6NDD5	238 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	ETV2	O00321	342 aa	Predicted RBP	4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	PODXL	O00592	558 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	DAPK3	O43293	454 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	DKC1	O60832	514 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	4e-18	■■■■■ 27.1
RHOT1-208	ENST00000580976	ENDOD1	O94919	500 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	NDST3	O95803	873 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	ABHD16A	O95870	558 aa		4.89	□□□□□ -1.63
RHOT1-208	ENST00000580976	TK1	P04183	234 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms