RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 RPA1P27694 616 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 RAP1GAPP47736 663 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 RARRES1P49788 294 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 SOX4Q06945 474 aaPredicted RBP21.14■□□□□ 0.97
LIMD2-209ENST00000580222 PLA2G2CQ5R387 149 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 PSAPL1Q6NUJ1 521 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 PKN3Q6P5Z2 889 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 CATSPER3Q86XQ3 398 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 KDF1Q8NAX2 398 aaPredicted RBP21.14■□□□□ 0.97
LIMD2-209ENST00000580222 DEPDC1BQ8WUY9 529 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 CALML4Q96GE6 196 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 ANKEF1Q9NU02 776 aa21.14■□□□□ 0.97
LIMD2-209ENST00000580222 EPN2O95208 641 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 PRKCBP05771 671 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 SPATA31C1P0DKV0 1188 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 HOXA6P31267 233 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 ELF1P32519 619 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 TEAD2Q15562 447 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 FAM187BQ17R55 369 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 CDCA2Q69YH5 1023 aaPredicted RBP21.13■□□□□ 0.97
LIMD2-209ENST00000580222 TCEAL6Q6IPX3 200 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 BSNDQ8WZ55 320 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 TCEAL3Q969E4 200 aa21.13■□□□□ 0.97
LIMD2-209ENST00000580222 MMTAG2Q9BU76 263 aaKnown RBP21.13■□□□□ 0.97
LIMD2-209ENST00000580222 PRMT7Q9NVM4 692 aaPredicted RBP21.13■□□□□ 0.97
LIMD2-209ENST00000580222 TICRRQ7Z2Z1 1910 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 SLC26A4O43511 780 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 USO1O60763 962 aaKnown RBP21.12■□□□□ 0.97
LIMD2-209ENST00000580222 MYL4P12829 197 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 MUTP22033 750 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 MLLT6P55198 1093 aaPredicted RBP21.12■□□□□ 0.97
LIMD2-209ENST00000580222 LRRC32Q14392 662 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 CYP4A22Q5TCH4 519 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 SHKBP1Q8TBC3 707 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 EPSTI1Q96J88 318 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 CCDC43Q96MW1 224 aaKnown RBP21.12■□□□□ 0.97
LIMD2-209ENST00000580222 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
LIMD2-209ENST00000580222 POLR3BQ9NW08 1133 aaPredicted RBP21.12■□□□□ 0.97
LIMD2-209ENST00000580222 ITPR1Q14643 2758 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 MYBPHLA2RUH7 354 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 GOLGA6L4A6NEF3 574 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 SPECC1L-ADORA2AF8WAN1 911 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 N4BP3O15049 544 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 KPNA1P52294 538 aaPredicted RBP21.11■□□□□ 0.97
LIMD2-209ENST00000580222 MRPL58Q14197 206 aaKnown RBP21.11■□□□□ 0.97
LIMD2-209ENST00000580222 KARSQ15046 597 aaKnown RBP21.11■□□□□ 0.97
LIMD2-209ENST00000580222 ECM1Q16610 540 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 SHC4Q6S5L8 630 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 USP49Q70CQ1 688 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 ZFYVE19Q96K21 471 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 PLIN2Q99541 437 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 CCSER1Q9C0I3 900 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 DDX19AQ9NUU7 478 aaKnown RBP21.11■□□□□ 0.97
LIMD2-209ENST00000580222 FAM13BQ9NYF5 915 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 CCDC39Q9UFE4 941 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 FBXL5Q9UKA1 691 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 KIAA1024Q9UPX6 916 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 ARID2Q68CP9 1835 aa21.11■□□□□ 0.97
LIMD2-209ENST00000580222 CTHP32929 405 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 EPHA5P54756 1037 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 TWF1Q12792 350 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 PRPF4BQ13523 1007 aaKnown RBP21.1■□□□□ 0.97
LIMD2-209ENST00000580222 CCINQ13939 588 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 PON2Q15165 354 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 HYIQ5T013 277 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 STXBP5Q5T5C0 1151 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 RESP18Q5W5W9 173 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 CSGALNACT1Q8TDX6 532 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 GAB3Q8WWW8 586 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 LOXL4Q96JB6 756 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 PNMA5Q96PV4 448 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 NACC1Q96RE7 527 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 LRRC3Q9BY71 257 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 CCDC113Q9H0I3 377 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 GTSE1Q9NYZ3 720 aa21.1■□□□□ 0.97
LIMD2-209ENST00000580222 RALGAPA1Q6GYQ0 2036 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 CHADO15335 359 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 LIG1P18858 919 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 FCHO2Q0JRZ9 810 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 DGKKQ5KSL6 1271 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 CACNA2D4Q7Z3S7 1137 aa21.09■□□□□ 0.97
LIMD2-209ENST00000580222 C8orf33Q9H7E9 229 aaPredicted RBP21.09■□□□□ 0.97
LIMD2-209ENST00000580222 SETXQ7Z333 2677 aaKnown RBP21.08■□□□□ 0.97
LIMD2-209ENST00000580222 SMIM28A0A1B0GU29 152 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 TRAPPC3O43617 180 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 RPP40O75818 363 aaKnown RBP21.08■□□□□ 0.97
LIMD2-209ENST00000580222 PLCG1P19174 1290 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 FOXC1Q12948 553 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 NT5DC1Q5TFE4 455 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 CLEC17AQ6ZS10 378 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 ZNF512Q96ME7 567 aaPredicted RBP21.08■□□□□ 0.97
LIMD2-209ENST00000580222 POLD4Q9HCU8 107 aa21.08■□□□□ 0.97
LIMD2-209ENST00000580222 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 SRRM3A6NNA2 597 aaPredicted RBP21.07■□□□□ 0.96
LIMD2-209ENST00000580222 E9PMD0 336 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms