RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 SYCP3Q8IZU3 236 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 LEMD2Q8NC56 503 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 YIPF1Q9Y548 306 aa17.18■□□□□ 0.34
CRLF3-203ENST00000578692 TULP1O00294 542 aaPredicted RBP17.17■□□□□ 0.34
CRLF3-203ENST00000578692 CYP11A1P05108 521 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 TAF6P49848 677 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 EPHA5P54756 1037 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 PRKCQQ04759 706 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 PLD1Q13393 1074 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 MLF2Q15773 248 aaPredicted RBP17.17■□□□□ 0.34
CRLF3-203ENST00000578692 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 TMEM209Q96SK2 561 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 CRISPLD1Q9H336 500 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 ZFP14Q9HCL3 533 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 ASAH2Q9NR71 780 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 DSEQ9UL01 958 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 SLC27A5Q9Y2P5 690 aa17.17■□□□□ 0.34
CRLF3-203ENST00000578692 KANSL1LA0AUZ9 987 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 MTMR11A4FU01 709 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 NRG2O14511 850 aaPredicted RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 CYB561D2O14569 222 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 MOSPD3O75425 235 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 PDIA4P13667 645 aaKnown RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 GJA1P17302 382 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 GARTP22102 1010 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 EPHB3P54753 998 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 FAM78AQ5JUQ0 283 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 FOXD4L5Q5VV16 416 aaPredicted RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 METTL23Q86XA0 190 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 EFCAB13Q8IY85 973 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 ATAD1Q8NBU5 361 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 ZSWIM2Q8NEG5 633 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 PJA1Q8NG27 643 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 FOXD4L4Q8WXT5 416 aaPredicted RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 SAAL1Q96ER3 474 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 ZSWIM3Q96MP5 696 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 ASB16Q96NS5 453 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 PYM1Q9BRP8 204 aaKnown RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 DDX23Q9BUQ8 820 aaKnown RBP17.16■□□□□ 0.34
CRLF3-203ENST00000578692 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 FOXQ1Q9C009 403 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 TMEM206Q9H813 350 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 DLGAP2Q9P1A6 1054 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 SCN1AP35498 2009 aa17.16■□□□□ 0.34
CRLF3-203ENST00000578692 KPNA7A9QM74 516 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 CUTAO60888 179 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 PRPF6O94906 941 aaKnown RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 YEATS4O95619 227 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 FCARP24071 287 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 HSCBQ8IWL3 235 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 BORCS6Q96GS4 357 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 LRRC3Q9BY71 257 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 GPR88Q9GZN0 384 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 TNMDQ9H2S6 317 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 CUEDC2Q9H467 287 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 HSFX1Q9UBD0 423 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 PIEZO1Q92508 2521 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 LRRN2O75325 713 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 WNT7BP56706 349 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 TFAMQ00059 246 aaKnown RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 AMPD3Q01432 767 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 TEAD2Q15562 447 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 E2F4Q16254 413 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 SV2CQ496J9 727 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 SLC39A12Q504Y0 691 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 FRMD5Q7Z6J6 570 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 BRSK2Q8IWQ3 736 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 OR10T2Q8NGX3 314 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 SMARCD2Q92925 531 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 ZCWPW1Q9H0M4 648 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 RBAKQ9NYW8 714 aaPredicted RBP17.15■□□□□ 0.34
CRLF3-203ENST00000578692 ASB3Q9Y575 518 aa17.15■□□□□ 0.34
CRLF3-203ENST00000578692 GOLGA8IPA6NC78 632 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 GOLGA8JA6NMD2 632 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 EXTL3O43909 919 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 ZSCAN22P10073 491 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 GLULP15104 373 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 CD72P21854 359 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 PNPLA4P41247 253 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 GRM2Q14416 872 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 UBXN2BQ14CS0 331 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
CRLF3-203ENST00000578692 WSCD1Q658N2 575 aa17.14■□□□□ 0.33
CRLF3-203ENST00000578692 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms