RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CCR2P41597 374 aa12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 HVCN1Q96D96 273 aa12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 GCNAQ96QF7 691 aa12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 THG1LQ9NWX6 298 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 USP18Q9UMW8 372 aa12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 OGTO15294 1046 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 ATG13O75143 517 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 TOB1P50616 345 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 SLC12A3P55017 1021 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 ARPP19P56211 112 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 AMPD2Q01433 879 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 GUCY1B3Q02153 619 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 GRM2Q14416 872 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 VEPH1Q14D04 833 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 TEAD2Q15562 447 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 SPATA1Q5VX52 437 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 CENPPQ6IPU0 288 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 POTEHQ6S545 545 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 RNF19BQ6ZMZ0 732 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 KIAA1958Q8N8K9 716 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 C18orf25Q96B23 403 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 ASB7Q9H672 318 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 DOCK6Q96HP0 2047 aa12.21□□□□□ -0.46
SMARCE1-214ENST00000578112 MEFVO15553 781 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 ZNF131P52739 623 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 FOSBP53539 338 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 OVOS1Q6IE37 1185 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 ARMCX5Q6P1M9 558 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 TASP1Q9H6P5 420 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 RPF1Q9H9Y2 349 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 NDRG2Q9UN36 371 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 COL4A3Q01955 1670 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 DPYSL4O14531 572 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 MCM2P49736 904 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 OSTNP61366 133 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 SLFN12LQ6IEE8 588 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 SPPL2BQ8TCT7 592 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
SMARCE1-214ENST00000578112 MTMR11A4FU01 709 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ADRB1P08588 477 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 LIG4P49917 911 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 GLIPR1L2Q4G1C9 344 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ZSWIM3Q96MP5 696 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ANKFY1Q9P2R3 1169 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ZFHX2Q9C0A1 2572 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 CHURC1-FNTBB4DL54 471 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 SPECC1L-ADORA2AF8WAN1 911 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 K7ESF4 209 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 VNN2O95498 520 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 PLA2G4BP0C869 781 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 CD72P21854 359 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 KPNA1P52294 538 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 SIM2Q14190 667 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 C11orf74Q86VG3 221 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 LEO1Q8WVC0 666 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 CEP295NLQ96MC4 621 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 ZCWPW1Q9H0M4 648 aa12.19□□□□□ -0.46
SMARCE1-214ENST00000578112 PIRO00625 290 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 FAM189A1O60320 539 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CXCL8P10145 99 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 PFKLP17858 780 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CCNE1P24864 410 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CTHP32929 405 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 PRR23CQ6ZRP0 262 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CAMKK1Q8N5S9 505 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 BICD1Q96G01 975 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CALML4Q96GE6 196 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 PARD6AQ9NPB6 346 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 TBX20Q9UMR3 447 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 A0A0B4J269 797 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 EPN2O95208 641 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 PNPLA4P41247 253 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 MATR3P43243 847 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 SATB1Q01826 763 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 IL17AQ16552 155 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 ITPRIPL2Q3MIP1 535 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms