RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 ABCB5Q2M3G0 1257 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 TSTD2Q5T7W7 516 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 AOPEPQ8N6M6 819 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 ANKS1AQ92625 1134 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 KAT5Q92993 513 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 COA7Q96BR5 231 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 CLPTM1LQ96KA5 538 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 TEKT5Q96M29 485 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 DMRTA2Q96SC8 542 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 SPC25Q9HBM1 224 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 KMT5AQ9NQR1 393 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 TRHDEQ9UKU6 1024 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 MRFAP1Q9Y605 127 aa3.54□□□□□ -1.84
CDH8-204ENST00000577536 COL3A1P02461 1466 aaPredicted RBP3.54□□□□□ -1.84
CDH8-204ENST00000577536 E9PLN8 166 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 FZD9O00144 591 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 RPLP2P05387 115 aaKnown RBP3.53□□□□□ -1.84
CDH8-204ENST00000577536 CHRM2P08172 466 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 MYBL2P10244 700 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 ITPKBP27987 946 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 NPTX2P47972 431 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 RGS19P49795 217 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 SOX10P56693 466 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 NXPH1P58417 271 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 KRTAP10-11P60412 298 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 KRT85P78386 507 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 ITIH3Q06033 890 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 PAPD7Q5XG87 772 aaKnown RBP3.53□□□□□ -1.84
CDH8-204ENST00000577536 TAPT1Q6NXT6 567 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 GLCCI1Q86VQ1 547 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 B3GALNT2Q8NCR0 500 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 NSUN6Q8TEA1 469 aaKnown RBP3.53□□□□□ -1.84
CDH8-204ENST00000577536 TRIB1Q96RU8 372 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 SMOQ99835 787 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 VKORC1Q9BQB6 163 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 MAN1C1Q9NR34 630 aa3.53□□□□□ -1.84
CDH8-204ENST00000577536 CFAP20Q9Y6A4 193 aaKnown RBP3.53□□□□□ -1.84
CDH8-204ENST00000577536 SPATA31A3Q5VYP0 1347 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 SHTN1A0MZ66 631 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 WDR27A2RRH5 827 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 WIPF3A6NGB9 483 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 DNAJC9-AS1A6NH13 148 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 CGB1A6NKQ9 187 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 LINC00473A8K010 186 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 KRTAP29-1A8MX34 341 aaPredicted RBP3.52□□□□□ -1.85
CDH8-204ENST00000577536 VWC2LB2RUY7 222 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 F2RL2O00254 374 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 ABCG1P45844 678 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 GUCY2FP51841 1108 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 HNRNPMP52272 730 aaKnown RBP eCLIP3.52□□□□□ -1.85
CDH8-204ENST00000577536 SRSF4Q08170 494 aaKnown RBP3.52□□□□□ -1.85
CDH8-204ENST00000577536 MTMR1Q13613 665 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 PCBP2Q15366 365 aaKnown RBP eCLIP3.52□□□□□ -1.85
CDH8-204ENST00000577536 UAP1L1Q3KQV9 507 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 CCDC93Q567U6 631 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 PTF1AQ7RTS3 328 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 BHLHA9Q7RTU4 235 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 AMIGO2Q86SJ2 522 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 TTC7BQ86TV6 843 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 PDSS2Q86YH6 399 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 POC1BQ8TC44 478 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 SCAMP4Q969E2 229 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 VRK1Q99986 396 aaPredicted RBP3.52□□□□□ -1.85
CDH8-204ENST00000577536 CCDC8Q9H0W5 538 aaPredicted RBP3.52□□□□□ -1.85
CDH8-204ENST00000577536 BRD9Q9H8M2 597 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 KLC4Q9NSK0 619 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 SIDT1Q9NXL6 827 aaKnown RBP3.52□□□□□ -1.85
CDH8-204ENST00000577536 SERPINB13Q9UIV8 391 aa3.52□□□□□ -1.85
CDH8-204ENST00000577536 A0A0B4J269 797 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 MANSC4A6NHS7 340 aaPredicted RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 GCOM1H8Y6P7 765 aaPredicted RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 POLRMTO00411 1230 aaKnown RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 GABRDO14764 452 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 MALP21145 153 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 LPOP22079 712 aaPredicted RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 CYP2C19P33261 490 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 ADKP55263 362 aaKnown RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 PSMC1P62191 440 aaKnown RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 DSC2Q02487 901 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 ITKQ08881 620 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 SNAPC2Q13487 334 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 TUBB3Q13509 450 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 KHDC1Q4VXA5 237 aaKnown RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 SLC4A10Q6U841 1118 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 FAM9AQ8IZU1 332 aaPredicted RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 FBXO41Q8TF61 875 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 HASPINQ8TF76 798 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 DPF1Q92782 380 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 MTMR8Q96EF0 704 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 PBKQ96KB5 322 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 GNL3LQ9NVN8 582 aaKnown RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 RLIMQ9NVW2 624 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 CFAP97Q9P2B7 532 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 ST3GAL5Q9UNP4 418 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.51□□□□□ -1.85
CDH8-204ENST00000577536 WNT6Q9Y6F9 365 aa3.51□□□□□ -1.85
CDH8-204ENST00000577536 FNDC1Q4ZHG4 1894 aaPredicted RBP3.51□□□□□ -1.85
CDH8-204ENST00000577536 AOX1Q06278 1338 aa3.5□□□□□ -1.85
CDH8-204ENST00000577536 ADGRA2Q96PE1 1338 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms