RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 PCDHA10Q9Y5I2 948 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 PRPF4O43172 522 aaKnown RBP eCLIP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 C4BPAP04003 597 aaKnown RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 PECAM1P16284 738 aaPredicted RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 ATP2A2P16615 1042 aaKnown RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 ATF7P17544 494 aaPredicted RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 CLDN10P78369 228 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 DGKZQ13574 1117 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 CUL2Q13617 745 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 PSMD6Q15008 389 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 ARHGEF16Q5VV41 709 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 PHF13Q86YI8 300 aaPredicted RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 TDRPQ86YL5 185 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 C4orf33Q8N1A6 199 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 VPS37BQ9H9H4 285 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 APOBEC3GQ9HC16 384 aaKnown RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 GRID1Q9ULK0 1009 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 CHKBQ9Y259 395 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 USH1CQ9Y6N9 552 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 PTPRJQ12913 1337 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 RGPD3A6NKT7 1758 aaPredicted RBP18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 RGPD4Q7Z3J3 1758 aa18.22■□□□□ 0.51
TOM1L1-221ENST00000575882 RAD17O75943 681 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 VNN1O95497 513 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 TCF4P15884 667 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 LIG4P49917 911 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 YARSP54577 528 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 GPS1Q13098 491 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 MOGSQ13724 837 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 EAPPQ56P03 285 aaPredicted RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 FEZF2Q8TBJ5 459 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 SLITRK1Q96PX8 696 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 SMC6Q96SB8 1091 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 KRT1P04264 644 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 TARSP26639 723 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 RPA3P35244 121 aaPredicted RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 ACOT2P49753 483 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 NLRP11P59045 1033 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 MFSD7Q6UXD7 560 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 NLRX1Q86UT6 975 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 MRRFQ96E11 262 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 RBM41Q96IZ5 413 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 TMEM237Q96Q45 408 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 LRRC37BQ96QE4 947 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 LRMDAQ9H2I8 198 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 XPNPEP1Q9NQW7 623 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 PARVAQ9NVD7 372 aa18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 SMG5Q9UPR3 1016 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-221ENST00000575882 WFS1O76024 890 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 PSEN1P49768 467 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 RPL7AP62424 266 aaKnown RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 PDK4Q16654 411 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ALLCQ8N6M5 410 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 RBBP8NLQ8NC74 664 aaPredicted RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 MCPH1Q8NEM0 835 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 CNKSR1Q969H4 720 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 SLC5A4Q9NY91 659 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ARHGAP28Q9P2N2 729 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 IP6K2Q9UHH9 426 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 DGAT1O75907 488 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ATP5HO75947 161 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 TJP3O95049 919 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 STBD1O95210 358 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 RGS9BPQ6ZS82 235 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 BZW1Q7L1Q6 419 aaKnown RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ZBED8Q8IZ13 594 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 LRRC8CQ8TDW0 803 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 ATP6V0A1Q93050 837 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 POLR3FQ9H1D9 316 aaPredicted RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 BATF3Q9NR55 127 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 HAO1Q9UJM8 370 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 NFASCO94856 1347 aa18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
TOM1L1-221ENST00000575882 EDF1O60869 148 aaKnown RBP18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 CA4P22748 312 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 PAX7P23759 505 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SLC18A1P54219 525 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 PARP6Q2NL67 630 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 ANKRD20A2Q5SQ80 823 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 ANKRD20A1Q5TYW2 823 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 ANKRD20A3Q5VUR7 823 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 ADAM33Q9BZ11 813 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SENP1Q9P0U3 644 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SP4Q02446 784 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SLC1A5Q15758 541 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 SWSAP1Q6NVH7 229 aa18.19■□□□□ 0.5
TOM1L1-221ENST00000575882 DRICH1Q6PGQ1 229 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms