RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 KRT32Q14532 448 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 SLC29A2Q14542 456 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 KIF22Q14807 665 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 RAB3GAP1Q15042 981 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 AMOTQ4VCS5 1084 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 PABPC1LQ4VXU2 614 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 TIGD5Q53EQ6 642 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 FAM26FQ5R3K3 315 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 CFAP58Q5T655 872 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 PHF19Q5T6S3 580 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 LCE2CQ5TA81 110 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ATPAF1Q5TC12 328 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 MFSD4BQ5TF39 518 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 USP17L6PQ6QN14 398 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 TMCO3Q6UWJ1 677 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 RPTNQ6XPR3 784 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 KRT28Q7Z3Y7 464 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 AMIGO3Q86WK7 504 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 SIAH1Q8IUQ4 282 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 BCL6BQ8N143 479 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 LILRA2Q8N149 483 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 SLC15A4Q8N697 577 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 DNAJC5GQ8N7S2 189 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 STPG3Q8N7X2 389 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 LSMEM1Q8N8F7 131 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 DCBLD1Q8N8Z6 715 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 DTX3Q8N9I9 347 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 PIK3C3Q8NEB9 887 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 REPS2Q8NFH8 660 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 IL17RDQ8NFM7 739 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 FBXO18Q8NFZ0 1043 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 OR6Y1Q8NGX8 325 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 OR56A3Q8NH54 315 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ZNF384Q8TF68 577 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 CASKIN2Q8WXE0 1202 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ALG3Q92685 438 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 NKD2Q969F2 451 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 SHISA4Q96DD7 197 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 TIGD1Q96MW7 591 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 C7orf26Q96N11 449 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 TTC14Q96N46 770 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 TMEM209Q96SK2 561 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 DDX23Q9BUQ8 820 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 LSM14BQ9BX40 385 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 C11orf54Q9H0W9 315 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 PCDHAC1Q9H158 963 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 PABPC3Q9H361 631 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 HEYLQ9NQ87 328 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 SMYD2Q9NRG4 433 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 ANKEF1Q9NU02 776 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 TMEM160Q9NX00 188 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 MOCS1Q9NZB8 636 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 CFAP97Q9P2B7 532 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ORC3Q9UBD5 711 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 Q9UFV3 132 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ZFP69BQ9UJL9 534 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 MID2Q9UJV3 735 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 FBXO10Q9UK96 956 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ZMYND8Q9ULU4 1186 aaPredicted RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 ARHGAP26Q9UNA1 814 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ADAMTS8Q9UP79 889 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 GPR34Q9UPC5 381 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 RUVBL1Q9Y265 456 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 MTO1Q9Y2Z2 717 aaKnown RBP2.39□□□□□ -2.03
CHD3-217ENST00000574022 HCFC2Q9Y5Z7 792 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 ACTL7AQ9Y615 435 aa2.39□□□□□ -2.03
CHD3-217ENST00000574022 A0A087WZ62 844 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 PGPEP1LA6NFU8 196 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 PRR19A6NJB7 356 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 C1QTNF9BB2RNN3 333 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 RAB27BO00194 218 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 GRM6O15303 877 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 KCNQ3O43525 872 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 DNPH1O43598 174 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 USO1O60763 962 aaKnown RBP2.38□□□□□ -2.03
CHD3-217ENST00000574022 INMTO95050 263 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 RTN3O95197 1032 aaPredicted RBP2.38□□□□□ -2.03
CHD3-217ENST00000574022 HPXP02790 462 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 PRKCBP05771 671 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 SBK3P0C264 359 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 CD8BP10966 210 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 MTHFD1P11586 935 aaKnown RBP2.38□□□□□ -2.03
CHD3-217ENST00000574022 JUPP14923 745 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 RAC2P15153 192 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 GYPEP15421 78 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 HOXA10P31260 410 aaPredicted RBP2.38□□□□□ -2.03
CHD3-217ENST00000574022 CHRNA4P43681 627 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 MAPKAPK2P49137 400 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 SLC11A2P49281 568 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 MAN2A2P49641 1150 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 PNLIPRP1P54315 467 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 PRKAA2P54646 552 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 BCAT1P54687 386 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 DRG2P55039 364 aaKnown RBP2.38□□□□□ -2.03
CHD3-217ENST00000574022 UCP3P55916 312 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 DCAF7P61962 342 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 TMEM62Q0P6H9 643 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 SCAPQ12770 1279 aa2.38□□□□□ -2.03
CHD3-217ENST00000574022 SURF1Q15526 300 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms